Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04130 ATGGGCAGAGAAAATGATTTAGCAAGGACAAAGGAAGAAGTCAGTGATGATGGTTCCTCGACGGTTGAGAATGGGGATTTAGAATCTCATGCTCGAATTAGTCTGGACAAGGAAGGCTTGGAAACTTGTCGTGTGTGCCAATGTACTGAATCTGATAAAAGGGCAGATGCGGCGCTAGAATTTCTGGGTATCACCCCAGGTTCAGAATTGTGTAAAAGCAAGGGGGAAGTAGGGTGTGATGGCAATGGAATTCCCAGAAATATGTCTCTTAACAGAAACATTGAAAACAATACAGGGATGGTGGAATTTGTAAGCCCTGATGGGGAGGTTTTCATTTGTAAAAGCGATTTGGAACTTGGTTTGTCTCATCAAGATAAACTAATTGAACTGGGATGTTCTTGTAAAAACGATCTTGCTTTAGTACATTATGCTTGTGCACTCAAGTGGTTTGTCAACCATGGATCTACCATTTGTGAAATATGTGGACATATAGCAAATAATATCAGAGTTTCTGACTTCAATAAGGTTGTTGGTGCTTTGAAGGAGTATGAAGTATTGAGGGAAAGAACTGCTAGTGGTGATCCTGGTCTCGCACAAGCTCGTGCAAATGCTGGTGTGGATCCTGATGCAGTGGCTGCTATTCGGAGGCAACGGCTAAGTGAGATTGCGCTATGGTTTTGTCCTCATAATAGCAGTACCAATAACAACGTTAGCAATGTGGACACACTTTCACAGGTTGCTTCTGAGCAGCCTTTGAGCATTGTTACTGAAGATGTTGTCCCTGTACAGAATACTGCAACTAAATGGGCCGTGGAGGGTACAGGTATCCTGCTTGCTACGGGGCTGCTTACCATCACCCTTGCATGGCTTATAGCCCCTCGTGTTGGAAAGAAAACTGCTAGAAGTGGTCTTCATATCTTACTTGGAGGGGTATGTGCTTTAGCAGTGGTGGTTTTCTTCCGCTTTTCCCAACAATTAGTGCCCTTGTTGAGGGTTGGGCCATGGAAAGGACTACCTCACATTGAGTAG 1029 0.4402 MGRENDLARTKEEVSDDGSSTVENGDLESHARISLDKEGLETCRVCQCTESDKRADAALEFLGITPGSELCKSKGEVGCDGNGIPRNMSLNRNIENNTGMVEFVSPDGEVFICKSDLELGLSHQDKLIELGCSCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRVSDFNKVVGALKEYEVLRERTASGDPGLAQARANAGVDPDAVAAIRRQRLSEIALWFCPHNSSTNNNVSNVDTLSQVASEQPLSIVTEDVVPVQNTATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTARSGLHILLGGVCALAVVVFFRFSQQLVPLLRVGPWKGLPHIE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04130 342 Pfam RING-variant domain 125 161 IPR011016 GO:0008270
Phac2g04130 342 ProSiteProfiles Zinc finger RING-CH-type profile. 102 168 IPR011016 GO:0008270
Phac2g04130 342 SMART ringv_2 112 162 IPR011016 GO:0008270
Phac2g04130 342 MobiDBLite consensus disorder prediction 1 18 - -
Phac2g04130 342 PANTHER ZINC FINGER, RING-CH-TYPE 16 323 - -
Phac2g04130 342 SUPERFAMILY RING/U-box 125 164 - -
Phac2g04130 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 172 IPR013083 -
Phac2g04130 342 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04130 Phac-Chr2 40434088 40438549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04130 1 334 C3H Transcription Factor Family AT5G08750 60.870 3.21e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04130 - - gmx:100805323 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04130 2 40434088 40438549 Phac2g04130 2 40434088 40438549 ECH