Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04126 ATGGCTCTTTACGGTGAGAAAGAATGGTACTTTTTCTCCCCTCGAGACCGAAAATACCCAAACGGTTCACGACCGAACCGGGCGGCCGGAACCGGGTACTGGAAGGCCACCGGAGCGGATAAACCGATTGGAAAACCGAAAGCCCTTGGAATTAAGAAAGCCCTTGTGTTCTACGCGGGGAAAGCCCCGAAAGGAGTGAAGACCAATTGGATCATGCACGAATATCGCTTAGCCAACGTCGATAGATCTGCCTCCAAGAAAAACAACAATTTGAGGCTTGATGATTGGGTGCTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAATAATGGCGATGCTGTGGTGGATCAGAAACCGGCGAATTTACCAGAAGAGGTTTTGTTCCAGCCCGAGATGAAGCCTGACATCAAGATGTACGGCCACGATCATTTCAGGAACAGCCAATTGTACATGAACACGTCGGATTCGGTGCCGAGGTTAAATACAGACTCTAGCTGCTCGGAGCACGTGGTTTCGCCGGACGGCACCTGCGAGAAGGAGGTGCAGAGCGAGCCCAAGTGGAACGACCTCGAGTTGGGCCCGGACCTGGTTTCGGGCTACGATTTTAATTTCATGGAGCTGTCGACAGATGACGCTTTTGCCCCTCAAACCCAATACCAAATGAACCAGCCCCCGTGGCTGGATATGTTCGCGTACCTTCCCAAGACATTTTAA 723 0.5076 MALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNNGDAVVDQKPANLPEEVLFQPEMKPDIKMYGHDHFRNSQLYMNTSDSVPRLNTDSSCSEHVVSPDGTCEKEVQSEPKWNDLELGPDLVSGYDFNFMELSTDDAFAPQTQYQMNQPPWLDMFAYLPKTF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04126 240 Pfam No apical meristem (NAM) protein 5 77 IPR003441 GO:0003677|GO:0006355
Phac2g04126 240 Gene3D NAC domain 1 110 IPR036093 GO:0003677|GO:0006355
Phac2g04126 240 ProSiteProfiles NAC domain profile. 1 104 IPR003441 GO:0003677|GO:0006355
Phac2g04126 240 PANTHER NAC TRANSCRIPTION FACTOR 56 3 155 - -
Phac2g04126 240 SUPERFAMILY NAC domain 3 104 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04126 Phac-Chr2 40408361 40410204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04126 1 240 NAC Transcription Factor Family AT1G01720 57.371 1.16e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g04126 NAM 2.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04126 - - gmx:100170751 428.713