Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04106 ATGATGGAAGATGAGAACCATGCCACTTTGCCAAATGCTTTTAACTCCGGAAGCCCCGAAAGCCCTTGCTTAAAGACAACCAACACCAACATCAACAACATCAACATCAACACCCCAACCACACACAACAACAACATCAACAACAGTAATCATAACCATAATAACAACAACAATAACCACAACAAAGAACAAGACAGGTTTCTCCCTATTGCCAATGTGGGAAGAATCATGAAAAAGGTCATTCCTTCCAATGGAAAAATCTCTAAGGACGCAAAGGAAACTGTCCAAGAGTGTGTCTCTGAGTTCATCAGCTTCGTCACTGGAGAAGCCTCTGACAAATGTCAGAGGGAGAAGAGAAAGACCATCAATGGTGATGATGTCATATGGGCCATCACAACCCTAGGGTTTGAGGATTACGTTGAACCCTTGAAAATTTACCTTCAGAAATATAAAGAGATTGAAGGAGAAAAACTTAACATTCCAAAGCAACTTCGTTCTGAACAAAGGCTACAACAACACCAACAAAATAATAGTAACAGTAGCCAAGAAGATAATAATCAACAACAATTCAATGCTGCATATGCCTCAACCAATCTCATTTCTCAGCCTCCATATGTGGCCACTGATCAGAAGTTTTCACTACCCTTCTCTCCAAACTCAATTCAGAATCACCACATTGATTCAGTGGGCCACTGGTACGAATAA 705 0.4057 MMEDENHATLPNAFNSGSPESPCLKTTNTNINNININTPTTHNNNINNSNHNHNNNNNNHNKEQDRFLPIANVGRIMKKVIPSNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDVIWAITTLGFEDYVEPLKIYLQKYKEIEGEKLNIPKQLRSEQRLQQHQQNNSNSSQEDNNQQQFNAAYASTNLISQPPYVATDQKFSLPFSPNSIQNHHIDSVGHWYE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04106 234 ProSitePatterns NF-YB/HAP3 subunit signature. 98 114 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac2g04106 234 MobiDBLite consensus disorder prediction 1 63 - -
Phac2g04106 234 FunFam Nuclear transcription factor Y subunit B-3 56 183 - -
Phac2g04106 234 PRINTS CCAAT-binding transcription factor subunit A signature 114 132 - -
Phac2g04106 234 PRINTS CCAAT-binding transcription factor subunit A signature 133 151 - -
Phac2g04106 234 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Phac2g04106 234 Coils Coil 43 63 - -
Phac2g04106 234 Gene3D Histone, subunit A 53 197 IPR009072 GO:0046982
Phac2g04106 234 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 45 188 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac2g04106 234 MobiDBLite consensus disorder prediction 9 63 - -
Phac2g04106 234 MobiDBLite consensus disorder prediction 167 186 - -
Phac2g04106 234 SUPERFAMILY Histone-fold 64 187 IPR009072 GO:0046982
Phac2g04106 234 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 67 131 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04106 Phac-Chr2 40265980 40267006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04106 62 232 CCAAT-HAP3 Transcription Factor Family AT2G13570 64.481 3.01e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac2g04106 CBFD_NFYB_HMF 5.3e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04106 K08065 - gmx:100778216 305.834