Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04098 ATGATGGCTTCTGGAACTCTCAACCTTCCTCCTGGCTTTTCCTTCTCTCCAACTGATGAACAACTTCTCCTTCATTTTCTTTATCCCAAGACCTCTCTACCATCTCATCCCACCATCATTCCAGACCTTGACCTCTCTCTGCATGATCCATGGCACCTAAATGGTAAAGCGTTGTCAAGTGGAAATCAACACTATTTCTTCAGCAGAGCGAAGGAAAACAGATCCACAGAAAATGGGTATTGGAAGGAAATAGGAGTGACTGAAGCAGTAGTATCTGCATCTGAAAAAGTGGGGATGAAGAAGTACCTTGTGTTCAACCTTGGTGAAGCTCCACAAGGCACTGAAACCAGTTGGGTCATGCAAGAGTTTCATATTTGCTCATCAAGTTTTACCACTGCAAGTACTCGCGGAAGAAGAAAATCTGATCAATGTAGGAGCAAATGGGTTTTGTGCAAAGCCTATGAGAAGAAAAGTTCTGAATCTGAAGAAGGTGTAAATTGTTACAACGATGAGAATGACAGTGGAACTGAGCTTTCATGGCTAGATGAATTTTATATGTCATTAGATGATGATCTTGAAGAAGTTATGAGCCTTCCTAATTAG 603 0.4146 MMASGTLNLPPGFSFSPTDEQLLLHFLYPKTSLPSHPTIIPDLDLSLHDPWHLNGKALSSGNQHYFFSRAKENRSTENGYWKEIGVTEAVVSASEKVGMKKYLVFNLGEAPQGTETSWVMQEFHICSSSFTTASTRGRRKSDQCRSKWVLCKAYEKKSSESEEGVNCYNDENDSGTELSWLDEFYMSLDDDLEEVMSLPN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04098 200 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Phac2g04098 200 PANTHER NAC TRANSCRIPTION FACTOR 56 9 170 - -
Phac2g04098 200 ProSiteProfiles NAC domain profile. 9 156 IPR003441 GO:0003677|GO:0006355
Phac2g04098 200 Pfam No apical meristem (NAM) protein 10 125 IPR003441 GO:0003677|GO:0006355
Phac2g04098 200 Gene3D NAC domain 18 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04098 Phac-Chr2 40216259 40217391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04098 1 159 NAC Transcription Factor Family AT1G69490 37.500 1.17e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g04098 NAM 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04098 - - gmx:100779578 335.109