Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04083 ATGGCTGTAACGAAATTGATACCGGGGTTTCGGTTCAACCCCTCTGGTGTCGAGTTGGTCGTGTACTTTCTGAAGAGGAAAGTGATGGGGAAAAAGTTCGTTGGTGGTGTCATTACTGAACTTGACATATACAAGTATGCTCCATGGGATCTCCCAGATAAGTCTTGTCTAAGAACTGGGGAATTGGAATGGTACTTTTTCTGCCCGCTGGAGAAGAAATATGGCAGTGGGAGTAGGATGAAACGCTCTACTGAAATTGGGTACTGGAAAGCTACTGGGAACGATAGAGTTGTTCAGCACAATAATCGAACGGTGGGGATGATTAGAACACTGGTATTTCACCAGGGTAAATCGCCTAAAGGAAAAAGAACTGATTGGGTTATGCATGAGCATAGGCTTGAAGATAAGGACCTTGCTGACAAAGGAATTGTCCAGGATTCCTATGTGGTCTGCAAAGTATTTCAAAAGGACGGTCTTGGTCCCAGGAATGGTGCGCAATATGCAAGACCATTTAATGAGGAAGAGTGGAACGATGTAGAACTGGAAATACCTTTTAGTGCTTCAATTGCACCAGTTCCCATCTTGCCTATGATATCTGATGCTTCTGTCCGAAAGGACAATCCCCTCCCTGCTAGTGGATGTACATCATGTCTATCAAGATCAATGCCTTCACCTGGCACTGCAGATCCTTCTGATCCAAATGATCAAGCTGTTAACAATGATGATGAAGATATTTTACGCATGCTTGATATTTTTAAAGATGGTGACAAATTGTTTGAGGAGGCTAATAATGATCTAGAAAACATTGCTGAAGGTGTACCACTTTTAGATGAACTTTTCGTGGGGTTGAAAGACTACTTGGCATCTTCTCTTGCCGGTGTTTCCTCTTGCCAGAATGCTGAATTTAATACAAACGGAATGGTTACTACAGGTGATGTCGATGACTTGGACTTCCTAGAGTTAACTGACCTCGACATGCCATTGTTCTTGCCGAATACACAACCTTGA 1008 0.4296 MAVTKLIPGFRFNPSGVELVVYFLKRKVMGKKFVGGVITELDIYKYAPWDLPDKSCLRTGELEWYFFCPLEKKYGSGSRMKRSTEIGYWKATGNDRVVQHNNRTVGMIRTLVFHQGKSPKGKRTDWVMHEHRLEDKDLADKGIVQDSYVVCKVFQKDGLGPRNGAQYARPFNEEEWNDVELEIPFSASIAPVPILPMISDASVRKDNPLPASGCTSCLSRSMPSPGTADPSDPNDQAVNNDDEDILRMLDIFKDGDKLFEEANNDLENIAEGVPLLDELFVGLKDYLASSLAGVSSCQNAEFNTNGMVTTGDVDDLDFLELTDLDMPLFLPNTQP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04083 335 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Phac2g04083 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 206 - -
Phac2g04083 335 MobiDBLite consensus disorder prediction 214 235 - -
Phac2g04083 335 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Phac2g04083 335 MobiDBLite consensus disorder prediction 214 239 - -
Phac2g04083 335 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Phac2g04083 335 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04083 Phac-Chr2 40108458 40112214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04083 1 224 NAC Transcription Factor Family AT5G64060 55.556 1.58e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac2g04083 NAM 3.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04083 - - vra:106770001 547.74