Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04077 ATGGATTATCTCTTCTTCCTCTCTCTCTTCCTCCTCCTAACCCTCTCCGCCGGCCACCGAAAAGCCCCGCCAGTCGCCGCCGTCAAATCCGTCACGCCGGAGATCCAACAAGCCTGCGCTGCCACGCGATTTCCGCAGCAATGTCAAACCTCTCTCTCCCAATACCCTAAACTCCCGCCCAACCCCTCCTCTCTCCAGTTCATCCAGGCCGCCGTCGCCATCTACTCCGAAAACCTCGCCACCGCGCAGTCCATGGTAAAGTCCCTCCTGGACGACGCCGCCGGCAGCCGCAACCTCACCATGGCCGCCTCCACCTGCGTGGAAGTATTGGACAACTCGAACCACCGTACTTCCCTCGCCAGCGACGCGCTGCCACAAGGCAAAATCAAGGACGCGCGCGCGTGGCTGGGCGCCGCGCTCGCGTACCAGTATGACTGCTGGAGCAGCCTTAAATATGCGAACGAGTCCGCGGCCGTCGGCAAAGCCATGGCGTTCATTGACTCCCTCGAATCTCTCTCCAGCAACGCCCTCGGCATGGCCTTCTCCCTCGACGCCTTCGGAAACGATACCGCTTCGTGGAAGCCTCCCGTCACCGAGCGCAACGGGTTCTGGGGCACCGTCGCCTCCGGCGATTCCGGCCCCGTGGGAGGTGTTCCGCCCAATTTGAAGCCTGACGTTACGGTGTGTAAGAACGGAGCTGACGGCTGTTATAAAACCATACAAGAAGCCGTTAACGCCGCGCCAGATAACGGCGACGGGAAGAAGAGGTTTGTCATACTCATAAAAGAGGGAGTTTACAAGGAGACAGTTAGGATTCCGTTAGCTAAGAGGAATGTGGTGTTCTTGGGTGACGGCATTGGCAAGACGGTAATAACCGGTGACGCTAACGTGGGGCAACAAGCCATGACCACTTACAACTCTGCCACCGTCGCGGTTCTTGGGGATGGATTCATGGCAAAGGATCTGACGATTGAGAACACGGCTGGTCCTGACGCACACCAAGCAGTGGCATTCAGATCAGACAGTGATCTTTCGGTGATTGAGAATTGCGAATTCTTGGGCAACCAAGACACTCTCTATGCTCACTCCCTGCGCCAATTCTACAAGTCGTGCCGCATTGAGGGCAACGTGGATTTCATCTTTGGAAACTCTGCTGCAGTTTTCCAAGACTGTCTCATCCTGGTTCGTCCGAGGCAACTGCATCCAGAGAAGGGCGAGAACAATGCTATCACTGCACATGGGAGAACAGACCCTACACAACCCACAGGCTTTGTTTTCCAGAACTGTGTGATTAATGGGACGGAGGAGTACCTGGCTTTGTATCACAGCAACCCTAAGGTGCACAAGAACTATTTGGGTAGGCCTTGGAAGGAGTATTCCAGAACGGTTTTCGTTAATTCAGAGTTGGCGGTGATTTTGACACCCCAGGGTTGGATGCCATGGAGTGGTGACTTTGCCCTCAAGACCCTCTACTATGGGGAGTTTGGGAACAAGGGACCTGGTTCTGATTTGTCTCAGAGGGTGTCCTGGAGTAGCAAGATCCCTCAAGACCACGTCCTAGCGTATTCAGTGCAGAATTTCATTCAAGGAAATGATTGGATTCCATCATCATCTGCCGGTACCCCTTCGTCGTAA 1635 0.5498 MDYLFFLSLFLLLTLSAGHRKAPPVAAVKSVTPEIQQACAATRFPQQCQTSLSQYPKLPPNPSSLQFIQAAVAIYSENLATAQSMVKSLLDDAAGSRNLTMAASTCVEVLDNSNHRTSLASDALPQGKIKDARAWLGAALAYQYDCWSSLKYANESAAVGKAMAFIDSLESLSSNALGMAFSLDAFGNDTASWKPPVTERNGFWGTVASGDSGPVGGVPPNLKPDVTVCKNGADGCYKTIQEAVNAAPDNGDGKKRFVILIKEGVYKETVRIPLAKRNVVFLGDGIGKTVITGDANVGQQAMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNSAAVFQDCLILVRPRQLHPEKGENNAITAHGRTDPTQPTGFVFQNCVINGTEEYLALYHSNPKVHKNYLGRPWKEYSRTVFVNSELAVILTPQGWMPWSGDFALKTLYYGEFGNKGPGSDLSQRVSWSSKIPQDHVLAYSVQNFIQGNDWIPSSSAGTPSS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04077 544 PANTHER PECTINESTERASE 16 535 - -
Phac2g04077 544 SUPERFAMILY Pectin lyase-like 223 537 IPR011050 -
Phac2g04077 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 183 IPR035513 -
Phac2g04077 544 Pfam Pectinesterase 225 531 IPR000070 GO:0030599|GO:0042545
Phac2g04077 544 SMART PMEI_2 30 179 IPR006501 GO:0004857
Phac2g04077 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 179 IPR035513 -
Phac2g04077 544 CDD PMEI-like_3 38 179 - -
Phac2g04077 544 Pfam Plant invertase/pectin methylesterase inhibitor 35 179 IPR006501 GO:0004857
Phac2g04077 544 FunFam Pectinesterase 220 543 - -
Phac2g04077 544 FunFam Probable pectinesterase/pectinesterase inhibitor 51 33 182 - -
Phac2g04077 544 Gene3D - 220 541 IPR012334 -
Phac2g04077 544 NCBIfam pectinesterase inhibitor domain 9 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04077 Phac-Chr2 39994980 39997704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04077 24 533 Carbohydrate Esterase AT5G09760 62.330 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04077 - - gmx:100819675 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04077 2 39994980 39997704 Phac2g04077 2 39994980 39997704 ECH