Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04066 ATGGATTATGAGCAATTTGATTTCTCATTTGGCCCTCCTTACTTGAACCAACTCCATGAGTGTTACTTAGAAAATGCATTCCCATTCCAAACAGAAGATATATCATCACCAAATACCATCCTGGATGAAATGTTTGGTCAAGAGTCTTTGGAGTTGCTTCTGCAACACACAAACAACCAGGACTTTGGTTTTATGAATCATAATGATCCATTAGAGATTGAATTCTGTGATGGATTTGCCCCTAGTTCTGAGGAAAATGTGCATGTTGCAATGGAAGAAGGGGATTCTTATTTGAAGGGAATCCAAGCAGAGGTAATGGAACCGACTAGTTTAGCTGATCTTTTGTTAACAGGAGCTGAAGCTGTTGAAGCACACAACTGGGCTCTTGCTTCAGACATAATTGAGAAACTTAATAAGGCATCTTCTTTAGAAACCGGTGATGGTTTGTTGAACAGGTTGGCTCTTTTCTTTACTCAGGGTCTGTATTATAAAAGTACAAATGCCCCTGAACTGTTGCAGCGTGGTGCTGTTTCTACACACACAAATGCTTTCTGTGTGTTTCAGGTTCTCCAAGAACTCTCACCCTATGTGAAATTTGCTCATTTCACCGCAAACCAAGCAATCTTAGAAGCCACGGAAGGTGCTGAGAATGTTCACATCATTGATTTTGACATCATGGAGGGAATCCAGTGGCCACCCTTGATGGTTGACCTTGCAATGAGGAAAAGTACTACTTCCCTTAGAGTATCAGCCATCACAGTGGACCAGAGAGGTGCTGCTTCTGCTCAACAAACAGGAAGAAGGCTCAAAGAGTTTGCAGCTTCTATCAACTTTCCATTTGTGTTTGATCAAATCATGATGGAAAGAGAAGAAGATATTCAAGGAATTGAACTTGATCAAACACTCATAGTCAACTGTATGATACACCAGTGGATGCCTAATAGGAGCTTCTCACTGGTCAAAACCTTTTTGGATGGTGTAACCAAATTGTCCCCAAGGCTTGTGGTTTTAGTGGAGGAAGAACTATTTAATTTTTCTAGGCTCAAATCCATGTCCTTTGTTGAGTTTTTCTGTGAGGCTTTACATCACTACACTGCACTTTGTGATTCACTTGCTAGTAGTCTATGGGGTAGCCACAAGATGGAGATGACCCTGATAGAGAAAGAGATTTTGGGGCTTAGAATCTTGGACAGTGTGAGGGAGTTTCCTTGTGAGAGAGAGGAGAGAAAGGTTTGGGAGGAAGGGTTTTATTCCTTGAAAGGGTTTAGATGTGTTCCCATGAGTACATGTAATATTTCACAAGCCAAGTTCTTGGTAAGCCTCTTTGGTGGAGGGTATTGGGTCCAATTCGAGCAGGGTAGGTTGGCCTTGTGTTGGAAGTCAAGGCCTTTGACTGTGGCTTCAATCTGGGTACCAAAGGGTTATTCGAGTGACAAAGTCAAATAG 1446 0.4184 MDYEQFDFSFGPPYLNQLHECYLENAFPFQTEDISSPNTILDEMFGQESLELLLQHTNNQDFGFMNHNDPLEIEFCDGFAPSSEENVHVAMEEGDSYLKGIQAEVMEPTSLADLLLTGAEAVEAHNWALASDIIEKLNKASSLETGDGLLNRLALFFTQGLYYKSTNAPELLQRGAVSTHTNAFCVFQVLQELSPYVKFAHFTANQAILEATEGAENVHIIDFDIMEGIQWPPLMVDLAMRKSTTSLRVSAITVDQRGAASAQQTGRRLKEFAASINFPFVFDQIMMEREEDIQGIELDQTLIVNCMIHQWMPNRSFSLVKTFLDGVTKLSPRLVVLVEEELFNFSRLKSMSFVEFFCEALHHYTALCDSLASSLWGSHKMEMTLIEKEILGLRILDSVREFPCEREERKVWEEGFYSLKGFRCVPMSTCNISQAKFLVSLFGGGYWVQFEQGRLALCWKSRPLTVASIWVPKGYSSDKVK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04066 481 ProSiteProfiles GRAS family profile. 102 471 IPR005202 -
Phac2g04066 481 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 95 466 IPR005202 -
Phac2g04066 481 Pfam GRAS domain family 112 470 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04066 Phac-Chr2 39887644 39889269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04066 111 470 GRAS Transcription Factor Family AT5G41920 33.333 5.39e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac2g04066 GRAS 1.6e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04066 - - gmx:100804613 843.188