Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g04063 | ATGTATGCTTCAACTTCCTTTACTACGCAATTGGTCCGTGACCTTCTCATGGACTCAAGCTCAAGAAAGCTACTCCTTCAAGAACCTCTTCATCAAGACTTGGCCAAATCCCCAGATTCCATTAGTTTCAACTCAACCGACTCGTATTTCAAAGCTCATGACTTCAACGCAAATGTTGTCATGATCCTCGCAGTCCTTCTGTGTGCTGTTATTTGCTCACTCGGCTTGAACTCCATCATAAAGTGTGTCCTGAGATGCTCAAACATAGTCATCAACGACCCTTCAAGTATGAGCAACAGCCCTTCAAGTGTGAGCTACAGCCCTTCACCACGATTGGCCAACACAGGAATCAAGAAGAAAGCCCTCAAGACTTTTCCTACTGTGAGCTACTCAACCGAGTTGAAACTCCCAGGTTTGGACACAGAGTGTGTGATATGCCTCTCAGAGTTTGACAATGGTGATAAGGTACGCATTTTGCCAAAATGCAACCATGGTTTCCACGTTCGTTGCATTGACAAATGGCTGAGTTCACACTCATCATGCCCCAAGTGCAGACAGTGCCTCATTGAATGCAAGAAAATTGTTGGATCCCAACCACTAGTTCCAGAAACCATTATAAGGATCCAACCACTTGAACCTGAAGGTTTGGAGCGTAACTATAGGGAAGTATGCTAG | 675 | 0.4489 | MYASTSFTTQLVRDLLMDSSSRKLLLQEPLHQDLAKSPDSISFNSTDSYFKAHDFNANVVMILAVLLCAVICSLGLNSIIKCVLRCSNIVINDPSSMSNSPSSVSYSPSPRLANTGIKKKALKTFPTVSYSTELKLPGLDTECVICLSEFDNGDKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIECKKIVGSQPLVPETIIRIQPLEPEGLERNYREVC* | 225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g04063 | 224 | CDD | RING-H2_EL5-like | 142 | 185 | - | - | |
Phac2g04063 | 224 | SMART | ring_2 | 143 | 184 | IPR001841 | - | |
Phac2g04063 | 224 | FunFam | RING-H2 finger protein ATL73 | 105 | 190 | - | - | |
Phac2g04063 | 224 | SUPERFAMILY | RING/U-box | 121 | 191 | - | - | |
Phac2g04063 | 224 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 106 | 189 | IPR013083 | - | |
Phac2g04063 | 224 | ProSiteProfiles | Zinc finger RING-type profile. | 143 | 185 | IPR001841 | - | |
Phac2g04063 | 224 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 18 | 215 | IPR044602 | GO:0016567|GO:0016740 | |
Phac2g04063 | 224 | Pfam | Ring finger domain | 142 | 185 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g04063 | Phac-Chr2 | 39835640 | 39836575 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g04063 | 25 | 189 | C3H Transcription Factor Family | AT3G10910 | 46.667 | 7.60e-42 | 138 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g04063 | K19040 | - | gmx:100527126 | 367.851 |