Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04063 ATGTATGCTTCAACTTCCTTTACTACGCAATTGGTCCGTGACCTTCTCATGGACTCAAGCTCAAGAAAGCTACTCCTTCAAGAACCTCTTCATCAAGACTTGGCCAAATCCCCAGATTCCATTAGTTTCAACTCAACCGACTCGTATTTCAAAGCTCATGACTTCAACGCAAATGTTGTCATGATCCTCGCAGTCCTTCTGTGTGCTGTTATTTGCTCACTCGGCTTGAACTCCATCATAAAGTGTGTCCTGAGATGCTCAAACATAGTCATCAACGACCCTTCAAGTATGAGCAACAGCCCTTCAAGTGTGAGCTACAGCCCTTCACCACGATTGGCCAACACAGGAATCAAGAAGAAAGCCCTCAAGACTTTTCCTACTGTGAGCTACTCAACCGAGTTGAAACTCCCAGGTTTGGACACAGAGTGTGTGATATGCCTCTCAGAGTTTGACAATGGTGATAAGGTACGCATTTTGCCAAAATGCAACCATGGTTTCCACGTTCGTTGCATTGACAAATGGCTGAGTTCACACTCATCATGCCCCAAGTGCAGACAGTGCCTCATTGAATGCAAGAAAATTGTTGGATCCCAACCACTAGTTCCAGAAACCATTATAAGGATCCAACCACTTGAACCTGAAGGTTTGGAGCGTAACTATAGGGAAGTATGCTAG 675 0.4489 MYASTSFTTQLVRDLLMDSSSRKLLLQEPLHQDLAKSPDSISFNSTDSYFKAHDFNANVVMILAVLLCAVICSLGLNSIIKCVLRCSNIVINDPSSMSNSPSSVSYSPSPRLANTGIKKKALKTFPTVSYSTELKLPGLDTECVICLSEFDNGDKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIECKKIVGSQPLVPETIIRIQPLEPEGLERNYREVC* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04063 224 CDD RING-H2_EL5-like 142 185 - -
Phac2g04063 224 SMART ring_2 143 184 IPR001841 -
Phac2g04063 224 FunFam RING-H2 finger protein ATL73 105 190 - -
Phac2g04063 224 SUPERFAMILY RING/U-box 121 191 - -
Phac2g04063 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 189 IPR013083 -
Phac2g04063 224 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Phac2g04063 224 PANTHER RING-H2 FINGER PROTEIN ATL78 18 215 IPR044602 GO:0016567|GO:0016740
Phac2g04063 224 Pfam Ring finger domain 142 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04063 Phac-Chr2 39835640 39836575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04063 25 189 C3H Transcription Factor Family AT3G10910 46.667 7.60e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04063 K19040 - gmx:100527126 367.851