Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04053 ATGGATTCTAAGGATTTTCGTTCCATATTGGAGAGCGCGGGCATCGACATTTGGATGTTGATGGATGTCGCCATCGCAGTGGCGTCTGTCGACCACAGTGATGAATTGAGGCGTCGAAGAGACGGAATCGTGGAGCGCCTCTACGCCACGAGTTCCGTGTCATCTCCGCCGTGTCCAAATTGTGATATCGACGACGTTAGAGAAATCGAGATGCAAAGCAATGTTAATCCCTCCGTGGAGGAGGAAAAGGAAACTTGCGAAGTCTTGTTTGATGATGAACAAAAGAAGATTCTAGAGATTAAAGAGCAACTTGAAGATCCTCACCAGTCCATAGATTCGTTGTTGGAGCTGTTGCAGAATCTAGCAGACATGGATATCACATTCCAAGCCTTAGAAGAGACTGACATTGGGAGGCATGTGAATCGGTTGAGAAAGCATTCGTCTAATGACGTTAAGAAATTGGTGAAGTTGCTCGTCAGGAAGTGGAAGGAGATTATAGATGAATGGATGAAGTTGAAGACGCCAGGAGAAGCGACTACTACTGTCATGGCTGACGAGGACTCGCCACAAGAGAAAATCCTGCAAAATGGGCATCGTCAGGTTATAGAAATCTTTCGACTATTCAGTGTTTTTCCATGA 639 0.457 MDSKDFRSILESAGIDIWMLMDVAIAVASVDHSDELRRRRDGIVERLYATSSVSSPPCPNCDIDDVREIEMQSNVNPSVEEEKETCEVLFDDEQKKILEIKEQLEDPHQSIDSLLELLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKKLVKLLVRKWKEIIDEWMKLKTPGEATTTVMADEDSPQEKILQNGHRQVIEIFRLFSVFP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04053 212 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 90 179 IPR035441 -
Phac2g04053 212 CDD TFIIS_I 94 167 - -
Phac2g04053 212 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 94 175 IPR035441 -
Phac2g04053 212 ProSiteProfiles TFIIS N-terminal domain profile. 92 169 IPR017923 -
Phac2g04053 212 SMART TFS2_5 97 168 IPR003617 GO:0005634
Phac2g04053 212 Pfam TFIIS helical bundle-like domain 116 166 IPR017923 -
Phac2g04053 212 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 202 IPR044790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04053 Phac-Chr2 39776476 39778983 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac2g04053 Med26 5.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04053 - - gmx:100796457 301.982