Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04050 ATGGATTCTAAGGATTTTCGTTCCATATTGGAGAGCGCGGGCATCGACATTTGGATGTTGATGGATGTCGCCATCGCAGTGGCGTCTGTCGACCACAGTGATGAATTGAGGCGTCGAAGAGACGGAATCGTGGAGCGCCTCTACGCCACGAGTTCCGTGTCATCTCCGCCGTGTCCAAATTGTGATATCGACGACGTTAGAGAAATCGAGATGCAAAGCAATGTTAATCCCTCCGTGGAGGAGGAAAAGGAAACTTGCGAAGTCTTGTTTGATGATGAACAAAAGAAGATTCTAGAGATTAAAGAGCAACTTGAAGATCCTCACCAGTCCATAGATTCGTTGTTGGAGCTGTTGCAGAATCTAGCAGACATGGATATCACATTCCAAGCCTTAGAAGAGACTGACATTGGGAGGCATGTGAATCGGTTGAGAAAGCATTCGTCTAATGACGTTAAGAAATTGGTGAAGTTGCTCGTCAGGAAGTGGAAGGAGATTATAGATGAATGGATGAAGTTGAAGACGCCAGGAGAAGCGACTACTACTGTCATGGCTGACGAGGACTCGCCACAAGAGAAAATCCTGCAAAATGGGCATCGTCAGATTCCCGATTTTGCAGACTCGCCAAATGCACACAATGAGAGTTTTGGGTCAGAGCAAAACAACATTGAACCACAACAACGAAAACCTAAAGCAATTCCTCGCAAAGAATCTCCCCTACAACCATCGGCATCAAGACAAAGAGAGAGCAATTATGAGTTGGATAAACTTGCTTCAGCGAGAAAGCGACTTATAGAGAACTACAAAGAGGTTGCAAATGCCAAAAAGCAAAGAACGATCCAGGTGATGGATATCCATGAGTTGCCAAAACCCAAGAATGCCTTCTTCGGAAAAAACAAAGGTGGCACCAGTCAGCGAAGACACTGGTGA 927 0.4552 MDSKDFRSILESAGIDIWMLMDVAIAVASVDHSDELRRRRDGIVERLYATSSVSSPPCPNCDIDDVREIEMQSNVNPSVEEEKETCEVLFDDEQKKILEIKEQLEDPHQSIDSLLELLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKKLVKLLVRKWKEIIDEWMKLKTPGEATTTVMADEDSPQEKILQNGHRQIPDFADSPNAHNESFGSEQNNIEPQQRKPKAIPRKESPLQPSASRQRESNYELDKLASARKRLIENYKEVANAKKQRTIQVMDIHELPKPKNAFFGKNKGGTSQRRHW* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04050 308 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 90 179 IPR035441 -
Phac2g04050 308 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 308 IPR044790 -
Phac2g04050 308 MobiDBLite consensus disorder prediction 210 226 - -
Phac2g04050 308 CDD TFIIS_I 94 167 - -
Phac2g04050 308 MobiDBLite consensus disorder prediction 200 253 - -
Phac2g04050 308 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 94 175 IPR035441 -
Phac2g04050 308 Coils Coil 253 273 - -
Phac2g04050 308 ProSiteProfiles TFIIS N-terminal domain profile. 92 169 IPR017923 -
Phac2g04050 308 SMART TFS2_5 97 168 IPR003617 GO:0005634
Phac2g04050 308 Pfam TFIIS helical bundle-like domain 117 166 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04050 Phac-Chr2 39776476 39778983 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac2g04050 Med26 8.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04050 - - gmx:100796457 459.914