Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04035 ATGGCGAATCCCAGAGAACAGGGTAACGAGGGTGATCGGAGTGAAGCCAGAGACTGTCATTCGTCGTCAATGGCAATGGTGCTTTCAGGGTTGAATAGGGAGAGGGAGATGTCAGCCATGATCTCTGCTTTGACTCAAGTTGTTCGTGGAGAGGATCAGAGTGACGATCATTCGCTTCTTGATGGAAACATTGATGACAGTGCAATTGGTGGTGGCTCTGCATGTTCATCTTATTATGGAAACTCTGTTCCGAAGAGAAGGAGGGAAGGTGACAATACAAGTGATCACCCACGTGGAACTTCCTTCCCTGCTGTTTCAACATATGGAGATGGTGAAAGTTCAAGCGGGGTGAGAAGAAGGGAAACGAGAGAAATGGAGAATAGGGAGTACGATTACGAGTACAGGGGAGAGAGGGTGAGAGTGGAAGAGGAACCAAAGAGGAAATACAGAGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCTGCGGAAATAAGGGACCCATTCAAGGCTGCTAGAGTCTGGTTAGGAACATTCCAGACAGCGGAGGATGCGGCCAGAGCCTACGATGAAGCTTCCTTACGTTTCAGAGGCAACAAAGCCAAACTCAACTTCCCTGAAAATGTGAGGCTCAGAAACCAATCACAGCCACCACCAACCACCCATTTCACCGCACCCCTTTTCTCCATTCCGTCTACAACTGAACCCATTGTTCACACTCAGTCTCAGGCTCAGGGTTCACATGATTCCGGCTACTTTTACGATTATTCGCGTGTTCATGAGTTTCCCGTGAGCCTCTATGACCAGGTTGCCATGTCATCATCATTCTCTATGGCGGCTTCTCATCTTCAATCTTCACCTTCCTATTCTTCTTCCTCAACTATCACTTCTCCCCAACCACCTCCTCTTCTTCCTTCCCCTTATGCTACGCAACTACTCCCATGCTCTTCTTCTTCTGCTGCTGCTTACACAAACACCTCCCATCCTTCCACCAAATAG 996 0.489 MANPREQGNEGDRSEARDCHSSSMAMVLSGLNREREMSAMISALTQVVRGEDQSDDHSLLDGNIDDSAIGGGSACSSYYGNSVPKRRREGDNTSDHPRGTSFPAVSTYGDGESSSGVRRRETREMENREYDYEYRGERVRVEEEPKRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFQTAEDAARAYDEASLRFRGNKAKLNFPENVRLRNQSQPPPTTHFTAPLFSIPSTTEPIVHTQSQAQGSHDSGYFYDYSRVHEFPVSLYDQVAMSSSFSMAASHLQSSPSYSSSSTITSPQPPPLLPSPYATQLLPCSSSSAAAYTNTSHPSTK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04035 331 CDD AP2 148 207 IPR001471 GO:0003700|GO:0006355
Phac2g04035 331 SUPERFAMILY DNA-binding domain 148 206 IPR016177 GO:0003677
Phac2g04035 331 Pfam AP2 domain 148 197 IPR001471 GO:0003700|GO:0006355
Phac2g04035 331 MobiDBLite consensus disorder prediction 48 123 - -
Phac2g04035 331 ProSiteProfiles AP2/ERF domain profile. 148 205 IPR001471 GO:0003700|GO:0006355
Phac2g04035 331 PANTHER DNA-BINDING DOMAIN 118 272 IPR044808 GO:0003700|GO:0009873
Phac2g04035 331 MobiDBLite consensus disorder prediction 286 308 - -
Phac2g04035 331 Gene3D AP2/ERF domain 147 207 IPR036955 GO:0003700|GO:0006355
Phac2g04035 331 MobiDBLite consensus disorder prediction 1 31 - -
Phac2g04035 331 SMART rav1_2 148 211 IPR001471 GO:0003700|GO:0006355
Phac2g04035 331 MobiDBLite consensus disorder prediction 96 113 - -
Phac2g04035 331 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Phac2g04035 331 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Phac2g04035 331 FunFam Ethylene-responsive transcription factor 2 147 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04035 Phac-Chr2 39682114 39683629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04035 27 210 AP2-EREBP Transcription Factor Family AT5G64750 46.875 8.87e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g04035 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04035 - - var:108344045 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04035 2 39682114 39683629 Phac2g04035 2 39682114 39683629 ECH
Phac2g04035 2 39682114 39683629 Phac9g01091 9 8435742 8437565 ECH