Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04027 ATGGGATGCCTTAACTCCAAATATTCTCCTCATAGGAACGCTGAGAGAAGATTGAAAGGAGAGAAAGAAGATGCAACAAAATCATTGACGCAGAACCACAACAAGGACCATTCATATAACAGGTTGAAAGAAAAGATAGAAAGAGTAGTATCCAAAGAAAAAGAAAGGGATAATAGTAATAGTGAGATAAAGGGTGTTGCTAGAAACGATAACAAGAGTGATGAGGTTGGTGAGAATGTTCCTCAGAGATCTCAGGAAAAGAAGAATATTGTTGCAAACTTTGAGTCTGTGGAGGGTTGGCCAAAATGGCTAGTTGATAATATCCCACCAAACGTGTTGGATAGCTTGGTTCCCAGGAGTGCTGATTCCTATGAAAAACTTGGAAAGGTGGGGCATGGAACATATAGCAATGTATACAAAGCCCGAGATAAGGAGAGTGGAAAGATTGTGGCTTTGAAGAAGGTAAGGTTTGACACATCAGATCCTGAAAGCATAAAGTTTATGGCGAGAGAGATTATGATACTGCAGAAGCTGGATCATCCCAATGTCATCAAACTACAAGGACTTGCAACATCACGGATGCAGTATAGTCTTTATCTTGTTTTTGATTACATGCATTCTGACCTTACAACAATTATCTCTCGCTCTAGGGACAAACTCACTCAACCAAAGATCAAGTGTTATATGCAGCAACTGCTTCTGGGGCTCCAGCATTGTCATGAGAGAGGAGTTATGCATAGAGATATTAAACCTTCCAACTTGTTAGTGGACAAAAAAGGGGTGCTAAAAATTGCAGATTTTGGGCTAGCAAATTCTTTTGCTCTCAAACCTGAAGGGCCTTTCACAAATCGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACAGATTATGGATATGAAATTGATCTCTGGAGTGCAGGATGCTTATTGGCCGAGATGTTCCTAGGAAGGCCACTTATGCCCGGAAGAACAGAGGTTGAACAACTTCACATGATCTTCAAACTTTGTGGTTCACCTTCTGCGGATTATTGGATGAGAATGAAGCTAGTGACAAGCTTATTTCCACCACTTCATTACAAAGCTAATTATGATGAAAACTTTAAGGATTTTCCTCCCTCTGCTTCTGCTCTCTTGACTACACTTCTTCATCTAGATTCTCATACACGTGCCACAGCTGCTTCTGCACTTCAAAGCCAATTTTTCAAGTCAAGTCCATTAGCATGCGACGTTTCAGCTTTAGCAGTAACATACAAAGACGAAGATGAATACTCACAAACAAAAAGACGCAAACGGCGAAAGGGTCTGAAAAACAAAGGGCATTTATTTCAAACAAGTACATGCAATATGAACCAATCAGGAAAGAACAGTGTTTCTGAACAAAGCAGGAGAGATTCAGGATCATCCAAACAGAAGAGTGTGGCAGAAGACATGGAAGGTGAAGAAATTGGAAAAAGTGAAAGCAATAGAAGGTCAGTTTTTATGAGTATGAATGAATGTATATCCCCAGTTTTTGTGTCTGGTGTGAGAAAATCCCCTAAAACAGAGGGCCATCCGAATGCTCTTAAGAACATAAAAAACTATGCCCTCTTACAAGCCTCAATAATTGATATGATCAATCGCAATGAAGGAAATGAAATTGGTCCATTGCGAAAGTCCTTTTCTGCCTTGGATTTTGGCCTTCATCCAGAAAAACTATCAAGCCTCTACTCCCAGTTCAGAAATTGA 1740 0.4006 MGCLNSKYSPHRNAERRLKGEKEDATKSLTQNHNKDHSYNRLKEKIERVVSKEKERDNSNSEIKGVARNDNKSDEVGENVPQRSQEKKNIVANFESVEGWPKWLVDNIPPNVLDSLVPRSADSYEKLGKVGHGTYSNVYKARDKESGKIVALKKVRFDTSDPESIKFMAREIMILQKLDHPNVIKLQGLATSRMQYSLYLVFDYMHSDLTTIISRSRDKLTQPKIKCYMQQLLLGLQHCHERGVMHRDIKPSNLLVDKKGVLKIADFGLANSFALKPEGPFTNRVVTLWYRAPELLLGSTDYGYEIDLWSAGCLLAEMFLGRPLMPGRTEVEQLHMIFKLCGSPSADYWMRMKLVTSLFPPLHYKANYDENFKDFPPSASALLTTLLHLDSHTRATAASALQSQFFKSSPLACDVSALAVTYKDEDEYSQTKRRKRRKGLKNKGHLFQTSTCNMNQSGKNSVSEQSRRDSGSSKQKSVAEDMEGEEIGKSESNRRSVFMSMNECISPVFVSGVRKSPKTEGHPNALKNIKNYALLQASIIDMINRNEGNEIGPLRKSFSALDFGLHPEKLSSLYSQFRN* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04027 579 SMART serkin_6 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04027 579 Coils Coil 42 62 - -
Phac2g04027 579 MobiDBLite consensus disorder prediction 444 468 - -
Phac2g04027 579 FunFam probable serine/threonine-protein kinase At1g54610 111 206 - -
Phac2g04027 579 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Phac2g04027 579 Pfam Protein kinase domain 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04027 579 Gene3D Phosphorylase Kinase; domain 1 113 206 - -
Phac2g04027 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Phac2g04027 579 MobiDBLite consensus disorder prediction 1 87 - -
Phac2g04027 579 SUPERFAMILY Protein kinase-like (PK-like) 118 411 IPR011009 -
Phac2g04027 579 FunFam Mitogen-activated protein kinase 205 417 - -
Phac2g04027 579 ProSiteProfiles Protein kinase domain profile. 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g04027 579 MobiDBLite consensus disorder prediction 426 493 - -
Phac2g04027 579 Gene3D Transferase(Phosphotransferase) domain 1 207 445 - -
Phac2g04027 579 MobiDBLite consensus disorder prediction 10 82 - -
Phac2g04027 579 PANTHER CELL DIVISION PROTEIN KINASE 122 411 - -
Phac2g04027 579 MobiDBLite consensus disorder prediction 469 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04027 Phac-Chr2 39642997 39646377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04027 109 438 Core Cell Cycle Gene Families AT5G10270 44.253 2.04e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac2g04027 Pkinase 5.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04027 K08819 - gmx:102667260 820.076