Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04009 ATGATACTATTTAATTCAGTTAGTTTGTTATTTGATTATTGGTGCAGTAGTTGGGCCTTAATGGGTCACTTTACACTGTCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATACTTGGTCGAAGAGAAAACAGAACTTTCTTGTGCAAAATTCTTTTGCATCAGTTAGCATGGGAGATGAAAAGCCTTTTGACTTCTTACGCACTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACTATTAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTAATATTGAAAGGCCTTTATTCCGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTGGGAGTTTATGAACCTATAAAGCAGAAATTGTTGAGGATATTTCCTGAAAATCTGAGTGCTTTTAGTCATTTGACTGCAGGTGCCATAGGGGGCTTGGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGAGATTTACCCTTTGATGCTATTCAATTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCAGTTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTTATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAGTATAAAGGAATTGTTGACTGTGTTCAAACCATTATTAAGGAAGAAGGACCTAGTGCCTTTTTGAAGGGTATTGGTCCCAGAGTACTATGGATAGGCATCGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTACAAAACGTTTTCTTGCTGAGAGGCGTCCTACTGTATCTCAGCAAACACACTCAGACAAAAGTAAAGATAAATAG 1044 0.4061 MILFNSVSLLFDYWCSSWALMGHFTLSVMVNDSAISLPDTWSKRKQNFLVQNSFASVSMGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFSHLTAGAIGGLAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAVIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIIKEEGPSAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPTVSQQTHSDKSKDK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04009 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 150 232 IPR018108 -
Phac2g04009 347 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 44 339 - -
Phac2g04009 347 Gene3D Mitochondrial carrier domain 53 344 IPR023395 -
Phac2g04009 347 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 73 340 - -
Phac2g04009 347 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Phac2g04009 347 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Phac2g04009 347 PRINTS Mitochondrial carrier protein signature 250 272 IPR002067 GO:0055085
Phac2g04009 347 PRINTS Mitochondrial carrier protein signature 205 223 IPR002067 GO:0055085
Phac2g04009 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 141 IPR018108 -
Phac2g04009 347 SUPERFAMILY Mitochondrial carrier 72 322 IPR023395 -
Phac2g04009 347 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 327 IPR018108 -
Phac2g04009 347 Pfam Mitochondrial carrier protein 71 105 IPR018108 -
Phac2g04009 347 Pfam Mitochondrial carrier protein 245 330 IPR018108 -
Phac2g04009 347 Pfam Mitochondrial carrier protein 150 231 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04009 Phac-Chr2 39526781 39537877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04009 148 333 Chloroplast and Mitochondria Gene Families AT1G07030 30.890 7.49e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04009 K15111 - gmx:100799825 580.482