Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04007 ATGGGAGATGAAAAGCCTTTTGACTTCTTACGCACTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACTATTAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTAATATTGAAAGGCCTTTATTCCGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTGGGAGTTTATGAACCTATAAAGCAGAAATTGTTGAGGATATTTCCTGAAAATCTGAGTGCTTTTAGTCATTTGACTGCAGGTGCCATAGGGGGCTTGGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGAGATTTACCCTTTGATGCTATTCAATTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCAGTTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTTATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAGTATAAAGGAATTGTTGACTGTGTTCAAACCATTATTAAGGAAGAAGGACCTAGTGCCTTTTTGAAGGGTATTGGTCCCAGAGTACTATGGATAGGCATCGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTACAAAACGTTTTCTTGCTGAGAGGCGTCCTACTGTATCTCAGCAAACACACTCAGACAAAAGTAAAGATAAATAG 870 0.4161 MGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFSHLTAGAIGGLAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAVIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIIKEEGPSAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPTVSQQTHSDKSKDK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04007 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 83 IPR018108 -
Phac2g04007 289 Gene3D Mitochondrial carrier domain 13 286 IPR023395 -
Phac2g04007 289 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 15 282 - -
Phac2g04007 289 Pfam Mitochondrial carrier protein 187 272 IPR018108 -
Phac2g04007 289 Pfam Mitochondrial carrier protein 13 47 IPR018108 -
Phac2g04007 289 Pfam Mitochondrial carrier protein 92 173 IPR018108 -
Phac2g04007 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 269 IPR018108 -
Phac2g04007 289 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 9 281 - -
Phac2g04007 289 SUPERFAMILY Mitochondrial carrier 14 264 IPR023395 -
Phac2g04007 289 ProSiteProfiles Solute carrier (Solcar) repeat profile. 92 174 IPR018108 -
Phac2g04007 289 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Phac2g04007 289 PRINTS Mitochondrial carrier protein signature 192 214 IPR002067 GO:0055085
Phac2g04007 289 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Phac2g04007 289 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04007 Phac-Chr2 39526580 39537877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04007 90 275 Chloroplast and Mitochondria Gene Families AT1G07030 30.890 4.20e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04007 K15111 - gmx:100811130 522.316