Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04005 ATGGGTCACTTTACACTGTCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATACTTGGTCGAAGAGAAAACAGAACTTTCTTGTGCAAAATTCTTTTGCATCAGTTAGCATGGGAGATGAAAAGCCTTTTGACTTCTTACGCACTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACTATTAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTAATATTGAAAGGCCTTTATTCCGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTGGGAGTTTATGAACCTATAAAGCAGAAATTGTTGAGGATATTTCCTGAAAATCTGAGTGCTTTTAGTCATTTGACTGCAGGTGCCATAGGGGGCTTGGCTGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGAGATTTACCCTTTGATGCTATTCAATTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCAGTTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTTATCAAGACAAGGTTAATGGTTCAAAACTAA 768 0.4128 MGHFTLSVMVNDSAISLPDTWSKRKQNFLVQNSFASVSMGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFSHLTAGAIGGLAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAVIGAFAGALTGAITTPLDVIKTRLMVQN* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04005 255 SUPERFAMILY Mitochondrial carrier 52 255 IPR023395 -
Phac2g04005 255 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 53 255 - -
Phac2g04005 255 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
Phac2g04005 255 Gene3D Mitochondrial carrier domain 52 255 IPR023395 -
Phac2g04005 255 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 255 IPR018108 -
Phac2g04005 255 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Phac2g04005 255 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 24 254 - -
Phac2g04005 255 Pfam Mitochondrial carrier protein 225 255 IPR018108 -
Phac2g04005 255 Pfam Mitochondrial carrier protein 130 211 IPR018108 -
Phac2g04005 255 Pfam Mitochondrial carrier protein 51 85 IPR018108 -
Phac2g04005 255 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Phac2g04005 255 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Phac2g04005 255 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Phac2g04005 255 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04005 Phac-Chr2 39526580 39537877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04005 51 254 Chloroplast and Mitochondria Gene Families AT1G07030 31.556 8.81e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04005 K15111 - gmx:100799825 447.973