Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03987 ATGGCGCCGAAGCAGATAACGCGTAAGGTTAGCAGAAACCCTGAATTGATAAGGGGCATTGGAAAGTACTCGAGATCACAAATGTACCACAAGAGGGGTATTTGGGCTATCAAAGCTAAAAACGGCGGCGTTTTCCCTCGCCACGATCCTACTCCCAAACCTGAAACTCCCGCTCAAAAACCTCCCAAATTTTACCCTGCTGATGATGTAAAGAAACCCCTTCTCAACAAGCACAAACCCAAAATCACCAAGCTCAGGGCTAGCGTTACCCCTGGGACAGTGTTGATTCTTCTTGCCGGTAGATTTAAGGGAAAGAGGGTAGTTTTTTTGAAGCAGCTTCCTTCCGGGTTGCTTCTTGTAACTGGTCCTTTCAAGATCAACGGAGTTCCATTGAGACGTGTCAACCAGTCATATGTTATTGCCACATCAACCAAAGTAGATGTTTCTGCTGTTAACGTGGACAAATTTGATGACAAATACTTTTCAAAGGAGTCCCAAAAAAAGAAGAAGAAGGGAGAGGGCGAGTTTTTTGAGGCAGAGAAGGAGGAAAAGAGTGTGTTGCCCCAGCAGAAGAAAGATGACCAGAAAACTGTGGACTCTGCATTGGTAAAGGCCATCGAGAGTGTTCCGGACTTGAATGCTTATCTGGGTGCTAGGTTTTCCCTAAAGGCTGGTGTGAAACCTCACGAGCTAGTCTTTTAG 702 0.4573 MAPKQITRKVSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGVFPRHDPTPKPETPAQKPPKFYPADDVKKPLLNKHKPKITKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDVSAVNVDKFDDKYFSKESQKKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDSALVKAIESVPDLNAYLGARFSLKAGVKPHELVF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03987 233 CDD KOW_RPL6 81 233 IPR041997 -
Phac2g03987 233 PANTHER 60S RIBOSOMAL PROTEIN L6 2 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Phac2g03987 233 Gene3D - 87 171 IPR014722 -
Phac2g03987 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Phac2g03987 233 MobiDBLite consensus disorder prediction 45 68 - -
Phac2g03987 233 ProSitePatterns Ribosomal protein L6e signature. 127 145 IPR000915 GO:0003735|GO:0005840|GO:0006412
Phac2g03987 233 FunFam 60S ribosomal protein L6 87 171 - -
Phac2g03987 233 Pfam Ribosomal protein L6, N-terminal domain 4 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Phac2g03987 233 SUPERFAMILY Translation proteins SH3-like domain 87 173 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03987 Phac-Chr2 39449021 39450748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03987 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 78.541 2.63e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03987 K02934 - gmx:100499766 402.134