Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g03979 | ATGACAGGGAAGAGAAACCAAACAATAATCAGTCCTGTGGGAAGTCCAACATCTGGTAACATCTCAGACAGCTCCTCAAAAGAACAAGACAGGTTCCTTCCCATAGCCAATGTTAGCCGCATCATGAAAAGGGCACTCCCAGCCAATGCCAAAATCTCTAAGGAAGCCAAAGAAACAGTTCAAGAGTGTGTGTCTGAGTTCATTAGCTTCATCACTGGTGAGGCCTCAGACAAGTGCCAGAGGGAAAAGAGGAAGACCATCAATGGTGATGATCTTCTTTGGGCCATGACAACCCTAGGATTTGAGAACTATGTTGGACCCTTGAAGCTCTATCTCCACAACTACAGGGAAACTGAGGGAGAAAAGAGCTCCATGGCCAAACAAGAAGAACACTCTCCAACTGATCAAACTCATCAAACCAATGATGGGGTGGCTGAACTCAACAAGTTGCCTCATTCTGTTACAACCAAAGCAGACTTCAACACTTTCAGTGGTGGCTTCTATTCTGTGGGGTCTCAAGTAACAGCTCCAAAGACCTTCACAGATATTGGAGGGATCAACGGTTATAGAGAGAGCTCCATGAACAGTATCATTGCTCAAAGTGCGGTCAGTGGTGACCAAGATGCAAGTGGTAATAGACTGATGCCACCCAACCTACGTTATAGGGTTGAATGGTAG | 678 | 0.4572 | MTGKRNQTIISPVGSPTSGNISDSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKLYLHNYRETEGEKSSMAKQEEHSPTDQTHQTNDGVAELNKLPHSVTTKADFNTFSGGFYSVGSQVTAPKTFTDIGGINGYRESSMNSIIAQSAVSGDQDASGNRLMPPNLRYRVEW* | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g03979 | 225 | Gene3D | Histone, subunit A | 19 | 152 | IPR009072 | GO:0046982 | |
Phac2g03979 | 225 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 32 | 96 | IPR003958 | - | |
Phac2g03979 | 225 | PRINTS | CCAAT-binding transcription factor subunit A signature | 79 | 97 | - | - | |
Phac2g03979 | 225 | PRINTS | CCAAT-binding transcription factor subunit A signature | 98 | 116 | - | - | |
Phac2g03979 | 225 | PRINTS | CCAAT-binding transcription factor subunit A signature | 60 | 78 | - | - | |
Phac2g03979 | 225 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 22 | 145 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Phac2g03979 | 225 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Phac2g03979 | 225 | SUPERFAMILY | Histone-fold | 29 | 140 | IPR009072 | GO:0046982 | |
Phac2g03979 | 225 | FunFam | Nuclear transcription factor Y subunit B-3 | 21 | 145 | - | - | |
Phac2g03979 | 225 | MobiDBLite | consensus disorder prediction | 121 | 141 | - | - | |
Phac2g03979 | 225 | MobiDBLite | consensus disorder prediction | 121 | 136 | - | - | |
Phac2g03979 | 225 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 63 | 79 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g03979 | Phac-Chr2 | 39405255 | 39406946 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g03979 | 23 | 129 | CCAAT-HAP3 Transcription Factor Family | AT4G14540 | 83.178 | 1.18e-63 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Phac2g03979 | CBFD_NFYB_HMF | 1.3e-26 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g03979 | K08065 | - | gmx:100810059 | 372.474 |