Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03958 ATGGATGCTTCATCCTCACAGTTTGTTTCCACAAGAAGAATGGAAGTGTATGATCCTATCCACCAACTTAGCATGTGGGAAGAAAATTTCAAAAGTAATGCTAATACCTTAACTGCGTCCACCTCCATAATTGAAGAGCTGGACATGAAGTTAGATAATCAAGTTCAGGTGCAATCAGAGGAGATTTCTCATGGAATATTTGGAACATCTGTGAACTACAACCAAGATCATAATAGACTAGCTGATAAGACACAAAGGCGTCTTGCACAAAATCGAGAGGCTGCTCGGAAGAGTCGTTTGAGGAGAAAGGCATACGTTCAGCAGTTGGAATCATGTCGTTTGAAGCTAATGCATTTAGAGCAAGAGGTAGATCATGCTAAACAACAGGTGTTTACTCATGGATCAATTTATATAGTTCGATTTTTTTCTTTTTCCCTCTTCTCTTGTGAATCTCTTGAGGCAACACAACTGCAGGGATTGTATATTGGTGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACAATTTTTAAGATGGAGTATCAACATTGGGTAGAGGAGCAAAATAGACATATCTTGGAAATGAGAACTGCTTTAAGTTCTCATATAGGTGACATACAACTGGGGAAACTTGTAAAAAGCATAATGGACCACTACTCCAAACTCTTTAGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTACGTTATGTCTGGCATGTGGATGACAACAGCTGAACGATTTTTCTTGTGGATTGGAGGATTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTCCCTCTGAGTGAACCTTTGACAGAGCAACAACGGTTTGATACATATGGCCTAGAAAAATCATGCCAACAAGCAGAAGATGCCCTTTCCCAAGGTATGGAAAAACTTCAGCAAATGCTTGCTGACAGTGTTGGGCCAGGACACCTAGTTGAAGGAACTCACATTCCACAGATGGACACTGCAATGGAGAGGATGGAAGCTCTGGTGAGCTTTGTGAATCAGGCTGATCATCTACGACAAGAAACCTTGCGGCAAATGTATCGAATACTTAGCATACGTGAGATTGGTCAGTTTCTGGTTGTTCTAGGAGAATATTTTCAACGCTTAAGGGCTTTGAGCACACTTTGGGCTAATCGTTCTCAAGAACCACTTGCTTAG 1194 0.4112 MDASSSQFVSTRRMEVYDPIHQLSMWEENFKSNANTLTASTSIIEELDMKLDNQVQVQSEEISHGIFGTSVNYNQDHNRLADKTQRRLAQNREAARKSRLRRKAYVQQLESCRLKLMHLEQEVDHAKQQVFTHGSIYIVRFFSFSLFSCESLEATQLQGLYIGDGLGSNNLGFAGSVNSGITIFKMEYQHWVEEQNRHILEMRTALSSHIGDIQLGKLVKSIMDHYSKLFSMKSAAAKADVFYVMSGMWMTTAERFFLWIGGFRPSELLKVLVPLSEPLTEQQRFDTYGLEKSCQQAEDALSQGMEKLQQMLADSVGPGHLVEGTHIPQMDTAMERMEALVSFVNQADHLRQETLRQMYRILSIREIGQFLVVLGEYFQRLRALSTLWANRSQEPLA* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03958 397 Pfam Seed dormancy control 199 273 IPR025422 GO:0006351|GO:0043565
Phac2g03958 397 Coils Coil 294 314 - -
Phac2g03958 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Phac2g03958 397 SMART brlzneu 79 139 IPR004827 GO:0003700|GO:0006355
Phac2g03958 397 ProSiteProfiles DOG1 domain profile. 181 391 IPR025422 GO:0006351|GO:0043565
Phac2g03958 397 Pfam bZIP transcription factor 82 111 IPR004827 GO:0003700|GO:0006355
Phac2g03958 397 Coils Coil 102 129 - -
Phac2g03958 397 FunFam BZIP family transcription factor 82 131 - -
Phac2g03958 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 111 IPR004827 GO:0003700|GO:0006355
Phac2g03958 397 Gene3D - 81 137 - -
Phac2g03958 397 PANTHER TRANSCRIPTION FACTOR TGA9 3 394 - -
Phac2g03958 397 SUPERFAMILY Leucine zipper domain 83 134 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03958 Phac-Chr2 39318528 39326566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03958 1 395 Calmodulin-binding Proteins AT5G65210 57.393 3.80e-160 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac2g03958 DOG1 3.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03958 K14431 - gmx:100780003 619.002