Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03954 ATGGATGCTTCATCCTCACAGTTTGTTTCCACAAGAAGAATGGAAGTGTATGATCCTATCCACCAACTTAGCATGTGGGAAGAAAATTTCAAAAGTAATGCTAATACCTTAACTGCGTCCACCTCCATAATTGAAGAGCTGGACATGAAGTTAGATAATCAAGTTCAGGTGCAATCAGAGGAGATTTCTCATGGAATATTTGGAACATCTGTGAACTACAACCAAGATCATAATAGACTAGCTGATAAGACACAAAGGCGTCTTGCACAAAATCGAGAGGCTGCTCGGAAGAGTCGTTTGAGGAGAAAGGCATACGTTCAGCAGTTGGAATCATGTCGTTTGAAGCTAATGCATTTAGAGCAAGAGGGATTGTATATTGGTGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACAATTTTTAAGATGGAGTATCAACATTGGGTAGAGGAGCAAAATAGACATATCTTGGAAATGAGAACTGCTTTAAGTTCTCATATAGGTGACATACAACTGGGGAAACTTGTAAAAAGCATAATGGACCACTACTCCAAACTCTTTAGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTACGTTATGTCTGGCATGTGGATGACAACAGCTGAACGATTTTTCTTGTGGATTGGAGGATTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTCCCTCTGAGTGAACCTTTGACAGAGCAACAACGGTTTGATACATATGGCCTAGAAAAATCATGCCAACAAGCAGAAGATGCCCTTTCCCAAGGTATGGAAAAACTTCAGCAAATGCTTGCTGACAGTGTTGGGCCAGGACACCTAGTTGAAGGAACTCACATTCCACAGATGGACACTGCAATGGAGAGGATGGAAGCTCTGGTGAGCTTTGTGAATCAGGCTGATCATCTACGACAAGAAACCTTGCGGCAAATGTATCGAATACTTAGCATACGTGAGATTGGTCAGTTTCTGGTTGTTCTAGGAGAATATTTTCAACGCTTAAGGGCTTTGAGCACACTTTGGGCTAATCGTTCTCAAGAACCACTTGCTTAG 1086 0.4162 MDASSSQFVSTRRMEVYDPIHQLSMWEENFKSNANTLTASTSIIEELDMKLDNQVQVQSEEISHGIFGTSVNYNQDHNRLADKTQRRLAQNREAARKSRLRRKAYVQQLESCRLKLMHLEQEGLYIGDGLGSNNLGFAGSVNSGITIFKMEYQHWVEEQNRHILEMRTALSSHIGDIQLGKLVKSIMDHYSKLFSMKSAAAKADVFYVMSGMWMTTAERFFLWIGGFRPSELLKVLVPLSEPLTEQQRFDTYGLEKSCQQAEDALSQGMEKLQQMLADSVGPGHLVEGTHIPQMDTAMERMEALVSFVNQADHLRQETLRQMYRILSIREIGQFLVVLGEYFQRLRALSTLWANRSQEPLA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03954 361 Coils Coil 258 278 - -
Phac2g03954 361 Pfam bZIP transcription factor 82 111 IPR004827 GO:0003700|GO:0006355
Phac2g03954 361 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Phac2g03954 361 Gene3D - 81 124 - -
Phac2g03954 361 SUPERFAMILY Leucine zipper domain 83 111 IPR046347 GO:0003700|GO:0006355
Phac2g03954 361 PANTHER TRANSCRIPTION FACTOR TGA9 3 358 - -
Phac2g03954 361 Coils Coil 102 122 - -
Phac2g03954 361 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 111 IPR004827 GO:0003700|GO:0006355
Phac2g03954 361 FunFam BZIP family transcription factor 82 123 - -
Phac2g03954 361 ProSiteProfiles DOG1 domain profile. 145 355 IPR025422 GO:0006351|GO:0043565
Phac2g03954 361 Pfam Seed dormancy control 163 237 IPR025422 GO:0006351|GO:0043565
Phac2g03954 361 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03954 Phac-Chr2 39318528 39326566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03954 1 359 Calmodulin-binding Proteins AT5G65210 60.541 6.33e-161 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac2g03954 DOG1 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03954 K14431 - gmx:100780003 613.224