Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03953 ATGGATGCTTCATCCTCACAGTTTGTTTCCACAAGAAGAATGGAAGTGTATGATCCTATCCACCAACTTAGCATGTGGGAAGAAAATTTCAAAAGTAATGCTAATACCTTAACTGCGTCCACCTCCATAATTGAAGAGCTGGACATGAAGTTAGATAATCAAGTTCAGGTGCAATCAGAGGAGATTTCTCATGGAATATTTGGAACATCTGTGAACTACAACCAAGATCATAATAGACTAGCTGATAAGACACAAAGGCGTCTTGCACAAAATCGAGAGGCTGCTCGGAAGAGTCGTTTGAGGAGAAAGGCATACGTTCAGCAGTTGGAATCATGTCGTTTGAAGCTAATGCATTTAGAGCAAGAGGTAGATCATGCTAAACAACAGGGATTGTATATTGGTGACGGATTGGGTTCTAATAATTTGGGTTTTGCTGGCTCTGTAAATTCAGGAATAACAATTTTTAAGATGGAGTATCAACATTGGGTAGAGGAGCAAAATAGACATATCTTGGAAATGAGAACTGCTTTAAGTTCTCATATAGGTGACATACAACTGGGGAAACTTGTAAAAAGCATAATGGACCACTACTCCAAACTCTTTAGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTACGTTATGTCTGGCATGTGGATGACAACAGCTGAACGATTTTTCTTGTGGATTGGAGGATTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTCCCTCTGAGTGAACCTTTGACAGAGCAACAACGGTTTGATACATATGGCCTAGAAAAATCATGCCAACAAGCAGAAGATGCCCTTTCCCAAGGTATGGAAAAACTTCAGCAAATGCTTGCTGACAGTGTTGGGCCAGGACACCTAGTTGAAGGAACTCACATTCCACAGATGGACACTGCAATGGAGAGGATGGAAGCTCTGGTGAGCTTTGTGAATCAGGCTGATCATCTACGACAAGAAACCTTGCGGCAAATGTATCGAATACTTAGCATACGTGAGATTGGTCAGTTTCTGGTTGTTCTAGGAGAATATTTTCAACGCTTAAGGGCTTTGAGCACACTTTGGGCTAATCGTTCTCAAGAACCACTTGCTTAG 1107 0.4155 MDASSSQFVSTRRMEVYDPIHQLSMWEENFKSNANTLTASTSIIEELDMKLDNQVQVQSEEISHGIFGTSVNYNQDHNRLADKTQRRLAQNREAARKSRLRRKAYVQQLESCRLKLMHLEQEVDHAKQQGLYIGDGLGSNNLGFAGSVNSGITIFKMEYQHWVEEQNRHILEMRTALSSHIGDIQLGKLVKSIMDHYSKLFSMKSAAAKADVFYVMSGMWMTTAERFFLWIGGFRPSELLKVLVPLSEPLTEQQRFDTYGLEKSCQQAEDALSQGMEKLQQMLADSVGPGHLVEGTHIPQMDTAMERMEALVSFVNQADHLRQETLRQMYRILSIREIGQFLVVLGEYFQRLRALSTLWANRSQEPLA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03953 368 SUPERFAMILY Leucine zipper domain 83 123 IPR046347 GO:0003700|GO:0006355
Phac2g03953 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Phac2g03953 368 Gene3D - 81 131 - -
Phac2g03953 368 PANTHER TRANSCRIPTION FACTOR TGA9 3 365 - -
Phac2g03953 368 Coils Coil 102 129 - -
Phac2g03953 368 Pfam bZIP transcription factor 82 111 IPR004827 GO:0003700|GO:0006355
Phac2g03953 368 FunFam BZIP family transcription factor 82 131 - -
Phac2g03953 368 ProSiteProfiles DOG1 domain profile. 152 362 IPR025422 GO:0006351|GO:0043565
Phac2g03953 368 Coils Coil 265 285 - -
Phac2g03953 368 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 111 IPR004827 GO:0003700|GO:0006355
Phac2g03953 368 SMART brlzneu 79 139 IPR004827 GO:0003700|GO:0006355
Phac2g03953 368 Pfam Seed dormancy control 170 244 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03953 Phac-Chr2 39318528 39326566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03953 1 366 Calmodulin-binding Proteins AT5G65210 61.622 7.06e-167 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac2g03953 DOG1 2.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03953 K14431 - gmx:100780003 634.409