Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03948 ATGAGAAGGTCTGTGTGTGAGTTATTGTATGAGCTTTATGCCAAGACAATAGTCCTTGTAACATACATGCTAATACAACTCATCCTTATCATTCGCTACCTTAAATCAAATACGCCTCCAATATCAACCACCCAATACCTCAGTTTCATCGAAGAGAAGAACCCTGCCATTCGTTGCACCACAAGACTCAAGGCAGAACACATAGACTGCAGAGTCTGCCTCTCTGAATTCCAGGAGGGGGAGAAGGTCAGGAACCTCAACTGCAGACACACTTTTCACAAGGATTGCCTGGACCAGTGGTTGCAGCAATACTGTGCCACTTGCCCACTTTGCAGACACAAGGTCTTGCCAGATCATGTTGTGGCCAACTACAACCTCCTTCAAAATCAGGTACAAGAAGAAGAAGAAGAGTATGATGGCAATGATCACCAACTCATCTTTTTGTTATCTGCATTAAGGGGTGGTAGCACTTTGCACACATATCTTTGA 489 0.4417 MRRSVCELLYELYAKTIVLVTYMLIQLILIIRYLKSNTPPISTTQYLSFIEEKNPAIRCTTRLKAEHIDCRVCLSEFQEGEKVRNLNCRHTFHKDCLDQWLQQYCATCPLCRHKVLPDHVVANYNLLQNQVQEEEEEYDGNDHQLIFLLSALRGGSTLHTYL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03948 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 117 IPR013083 -
Phac2g03948 162 ProSiteProfiles Zinc finger RING-type profile. 70 112 IPR001841 -
Phac2g03948 162 SUPERFAMILY RING/U-box 49 123 - -
Phac2g03948 162 SMART ring_2 70 111 IPR001841 -
Phac2g03948 162 PANTHER - 4 157 - -
Phac2g03948 162 Pfam Ring finger domain 69 112 IPR001841 -
Phac2g03948 162 Coils Coil 124 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03948 Phac-Chr2 39286969 39287457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03948 69 122 C3H Transcription Factor Family AT1G15100 57.407 5.47e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03948 K16282 - gmx:102669811 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03948 2 39286969 39287457 Phac2g03948 2 39286969 39287457 ECH