Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03939 ATGGCCACCACACTCGCTTGGAGACACGCTGCCAACAATGCAAATGATCTGGAAAGAAATGGTGATAGGAATACTCAAGATTCAGAGCCCCCAACACCACATTCTGTTCTGAAGATGGGATTTAGAGAGCGCAACAGCAGCATGGAGGATCCAGATGGAACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCTTATTCTGTGCAAGAGAAAGAATATTCCTTAAGGCAGCTATTGGAGCTTATAGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCAGGTCTGGTTCATTGAATGTGAAGATACAGGCAGCGACCGTCTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGGGTCAAGGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTAGTCTATTAAAGTCCAGTTCTACTGAAGGACAAATTGCTGCTGCAAATACTATTTATGCTGTCTCTCAGGGTGGTGTAAAGGATCATGTTGGTTCAAAAATATTTTCAACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGAAAACTGGCCTGAAGGCAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCCAGCAACACTGAGGGATTCTGGAATGCAACTATACGAGCTGGAGGAGTCGACATATTAGTGAAGTTACTGGCAAAAGCACAGCCCAGTAGTTTAGCTAATGTGTGCAATTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCGGAGGTGACAAAACAACTTCTGAAACTATTAGGCCCTGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAGGCAAGGCGAGAGATAGCCAATGCTAATGGTATTCCTTCTCTGATCAATGCTACCATAGCTCCTTCCAAAGAATTCATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGAGTGCTCTAGCAAACATCTCTGGTGGTTTGTCTTACGTCATATCTAGCCTTGGTCAAAGTCTTGAATCATGCACCTCACCTACCCAAATTGCTGACACATTAGGAGCTTTGGCATCAGCTCTCATGATATATGATAACAAGGCTGAATCAACCAGAGCATCAGATCCTTTGGTTGTCGAGCAGACATTACTCAAACAATTTGAGCCTCGCTTGCCCTTCCTTGTAAAGGAACGAACCATTGAAGCGCTTGCTAGTTTGTATGGAAATTCCGTACTTTCAAATAAACTTGCAAATGCCGATGCAAAACATCTGCTAGTTGGTTTGATAACAATGGCTGCAAATGACGTGCAAGACGAACTTATAAAAGCTCTGTTGACAGTGTGCAAAAGTGAAGGCAGTCTATGGCGTGCACTTCAGGGCCGTGAAGGAGTTCAACTATTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAGCAAGAGTGTGCAGTTGCCCTGCTTTGCCTTCTATCATTTGAAAATGATGAAAGTAAATGGGCAATTACTGCAGCTGGTGGCATACCTCCACTTGTTCAAATTTTGGAGACAGGATCAGCAAAAGCAAAGGAAGATTCAGCAACAATCCTTAAGAACCTGTGCAATCATAGCGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAAGATATTGCTGCAAAGACTTTAAATCATTTAATTCATAAATCAGATACTACAACCATTAGTCAGCTTACAGCTTTATTGACTAGTGATCTTCCTGATTCTAAGGTTTATGTTTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGCGACATTTTACGTGAAGGTAGTGCTGCCAGCGATGCATTTGATACTATGATAATATTATTGAGCTCTGCCAGAGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCTGTCAAAACTCTTTTGTCAGCCAAGAAATTGCTCAATGCTGAATCTGAAAGTATCCTGATTGAGTCCTCCCACTGCATGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTATCGCTAGAGATACATTATCCCCTCTAGTTTCACTAGCAAACTCTTCAGTTTTGGAAGTTGCAGAGATGGCCACATGTGCTCTGGCGAACCTTATTTTAGATGGTGAAATTGCAGAGAAAGCTATTGCAGAAGAAGTTATCTTATCTGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACTCATGCCGCAGCAGCAATTGCTCGCCTCCTACATTCTCGGGATGTTGATTATGCTGTAACTGATTGTGTAAATCGTGCTGGAACTGTTCTTGCATTAGTCTCTTTCTTAGATTCTGCTGTTAATGGATCTGTTGCTACATCAGAGGCTCTAGAAGCACTTGCCATCCTGTCCAGGTCGGTAGAGACCAGTGCAAATATTAAATCTGCTTGTGCTGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCTTGTGTATTGTTGATTCGGAGCCAATGTTGCAGGATAAAACTATTGAGATTTTATCTCGATTATGTAAGGATCAGCCTGTTGTTTTGGGAGATACTATTGTGTCAGCACCTGGATGCATATCTTCAATAGCTAAAAGAATAATTAGTTCCACAAATGTGAAGGTCAAAATTGGCGGAGCAGCACTTCTTATTTGTACTTCTAAAGCAAATCATCAGAGACTGGTGGAGGATCTGAGTTCGTCAAACTTGTGTGTCGATCTTATTCGATCTCTTGTTGATATTCTTGTTTCTGCCCTGCCTTCTTCGGGTTACCTGGATGATGACAACAAGGAACTCATTAGCATATGCAGGCACACAACAGAAGAGGCCAACAGTTCTGAATCCAACACTAGCACTAGCATTATCTGTGGTGTTGACTTGGCGCTATGGCTATTGTCTATTCTTGCTTGTAATGATGAAAAAAATAAAATTGCAATAATGGAGGCTGGAGCAATTGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCGCAATATTCTCAGCTCAATATGGTGAACATGCAGATGGACTACAAAGAAGATAGAATAATGTGGATTCATGCTTTGTTGTTGGCAATATTATTTCAAAATAGAGATATCATTCGAGCACATCCAACTATGAAATCTATACCTGCACTTACCAGTTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATAGCTAGCCTTGTCTGTAATGGTAGCAGGGGAACACTCCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTCTTGTGCGTTATCCTGATCAAGTGGCACTTGAGAGGTTGTTTCGAGTTGAAGACATAAGAGTTGGAGCCACTTCTCGGAAGGCTATACCTGCCTTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCTGGGGCACCATTTTTGGCACTTGTACTTTTGACTCAGCTCAGTAAAGATTGTCCTTCAAATATGAGTGTAATGGTGGAGTCTGGGGCCTTAGAGGCACTTACGAAGTATCTTTCACTCAGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTTCTAGGAATTCTGTTTAGCAGTGCTGAAATACGAAGACATGAATCAGCATTTGGTGCTGTTGCTCAACTTGTAGCTGTGCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCTTTGGAAAGTCTGTTTTCTGCTGATCACATCAGAAATGCAGAGATTGCTCGGCAGGCTGTTCAACCATTGGTGGAGATTCTCAGTACTGGTTCAGAAAAGGAGCAGCATGCTGCCATTGCTGCATTAGTGGGGTTACTGAGTGAAAATCCATCAAGAGCTCTTGCTGTTGCAGATGTTGAGAAAAATGCAGTGGAAGTTCTTTGTAGGATCCTTTCATCAAATTCTTCAATGGACCTGAAAGGGGATGCTGCTGAATTATGTTGTGCTCTCTTTGGAAATACAAGGATTCGGTCCACAGCAGCTGCTGCAAGTTGTGTTGAACCTCTTGTCTCTCTCCTGGTATCTGAGTTCAGTCCAGCTCATATTTCAGTTGTCCGGGCACTGGATAGGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTAGTTGGCCTACTGTCTGGTACGAATTATATACTACATGAGGCCATTTCCAGAGCTCTAGTCAAGTTGGGAAAAGACAGGCCTGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCGTACTTGACATCTTACATGAAGCACCTGATTATCTATGTGCTACTTTTGCAGAATTGTTGCGTATATTGACTAATAATACTAGCATAGCTAAAGGTACATCTGCTGCTAAAGTGGTTGAACCATTGTTTTTGTTACTGACAAGGCAGGAATTTGGGCCAGATGGACAGCACAGTGCATTGCAGGTGTTGGTTAATATCTTAGAACATCCAAAGTGTCGTGCTGACCATTCATTAACTTCTCGCCAAGTTATTGAACCACTTATCCCTTTGCTTGATTCTCCAATTTCAGCTGTGCAACAATTGGCTGCTGAGCTTCTTTCACATCTACTTCTTGAAGAACGCCTTCAGAAGGATCCCGTGACACAGCAAGCAATTGGCCCTCTCATTCGAGTTCTTGGTTCTGGTATACACATATTGCAACAGAGAGCTGTAAAAGCCCTTGTTAGTATTGCACTAACATGGCCTAACGAAATTGCTAAGGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCTGATCCTTCCCTTCCTCATGCTTTATGGGAGTCTGCTGCCTCGGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTGCCCATTGCTGTATTGGTAAGGTTGCTTCGATCTGGCTCAGAGAGCACGGTTGTTGGTGCTTTAAATGCTCTTCTGGTGCTAGAAAATGATGATGGAACTAGTGCAGAAGCTATGTCAGAAAGTGGAGCTATAGAGGCTCTCTTGGAGCTCCTGCGATCTCATCAGTGTGAGGAAACTGCTGCAAGGCTTTTAGAAGTATTGCTGAACAATGTAAAGATTCGAGAAACAAAAGTAACAAAATCAGCTATCATACCATTATCGCAGTACCTTCTGGACCCACAAACTCAAGCTCAGCAAGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAGGGTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTAAATGTTCTTGAAGACCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAGAATCTTGTGATGTACAGTCGGTCAAATAGGAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTACTTGATCTGATAGGTTCAAGTAATCCAGAAACATCAGTTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCAAATAACACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCCATAACTGCTGCTATTGAAAAAGATTTATGGGCTTCTGGAACTGTGAATGACGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCAAGACTTAGAGCAACTGAACCAGCGACACTTAGCATTCCCCATCTAGTTACAGCCTTAAAGACAGGTTCAGAAGCTTGTCAGGAAGCAGCATTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCTAGAGCTCAGTCAATTGCAGCTGCAGATGCTATCCCATTGCTGCAGTACTTGATCCAGTCTGGGCCACCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTGCCAGGAACATTGGTAGTGATCATCAAACGTGGTAACAACATGAAGCAATCTGTTGGAAATCCAAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCCCCAAGGCAAACCCAGGTGGTTTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGACCTTTGAGAGTCCTCCCAAAGGCCAGAAGCTTCATATCTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTTGGATCAGTAGCAGGAGAGTACGCTTTGTTGCCTCAAAGTAAAAGTGGGCCGCCACGGAATCTAGAGATAGAATTTCAGTGGTCTAACAAGTGA 6462 0.4276 MATTLAWRHAANNANDLERNGDRNTQDSEPPTPHSVLKMGFRERNSSMEDPDGTLASVAQCIEQLRQSSYSVQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLSLLKSSSTEGQIAAANTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLKTGLKAGNVVEGLLTGALKNLSSNTEGFWNATIRAGGVDILVKLLAKAQPSSLANVCNLLASVMMEDASVCSKVLTAEVTKQLLKLLGPGNDDSVRAEAAGALKSLSAQCKEARREIANANGIPSLINATIAPSKEFMQGECAQALQENAMSALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPLVVEQTLLKQFEPRLPFLVKERTIEALASLYGNSVLSNKLANADAKHLLVGLITMAANDVQDELIKALLTVCKSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSFENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSDILREGSAASDAFDTMIILLSSAREETQAKSASALAGIFETRKDVRESSIAVKTLLSAKKLLNAESESILIESSHCMAAIFLSIKENRDVAAIARDTLSPLVSLANSSVLEVAEMATCALANLILDGEIAEKAIAEEVILSATRILCEGTISGKTHAAAAIARLLHSRDVDYAVTDCVNRAGTVLALVSFLDSAVNGSVATSEALEALAILSRSVETSANIKSACAVLAEFPKSISPIVLCIVDSEPMLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIAKRIISSTNVKVKIGGAALLICTSKANHQRLVEDLSSSNLCVDLIRSLVDILVSALPSSGYLDDDNKELISICRHTTEEANSSESNTSTSIICGVDLALWLLSILACNDEKNKIAIMEAGAIDVLIDRISNCFSQYSQLNMVNMQMDYKEDRIMWIHALLLAILFQNRDIIRAHPTMKSIPALTSLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALVLLTQLSKDCPSNMSVMVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRRHESAFGAVAQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVGLLSENPSRALAVADVEKNAVEVLCRILSSNSSMDLKGDAAELCCALFGNTRIRSTAAAASCVEPLVSLLVSEFSPAHISVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGTNYILHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCATFAELLRILTNNTSIAKGTSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPKCRADHSLTSRQVIEPLIPLLDSPISAVQQLAAELLSHLLLEERLQKDPVTQQAIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLENDDGTSAEAMSESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAIIPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSNPETSVQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTALKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWDESFSWTFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK* 2154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03939 2153 SUPERFAMILY ARM repeat 422 727 IPR016024 -
Phac2g03939 2153 Pfam C2 domain 2032 2121 IPR000008 -
Phac2g03939 2153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2032 2135 IPR035892 -
Phac2g03939 2153 SMART C2_3c 2033 2129 IPR000008 -
Phac2g03939 2153 SMART arm_5 89 130 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1483 1523 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1441 1481 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1186 1229 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 562 602 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1859 1899 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1400 1440 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 520 560 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1732 1771 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1314 1354 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 728 766 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1571 1609 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 477 518 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 306 355 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 131 171 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 812 854 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 1231 1272 IPR000225 GO:0005515
Phac2g03939 2153 SMART arm_5 263 304 IPR000225 GO:0005515
Phac2g03939 2153 SUPERFAMILY ARM repeat 60 392 IPR016024 -
Phac2g03939 2153 Gene3D C2 domain 2030 2153 IPR035892 -
Phac2g03939 2153 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 24 2153 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Phac2g03939 2153 CDD C2 2034 2124 - -
Phac2g03939 2153 SUPERFAMILY ARM repeat 1679 2030 IPR016024 -
Phac2g03939 2153 Coils Coil 292 319 - -
Phac2g03939 2153 Coils Coil 2152 2153 - -
Phac2g03939 2153 Gene3D - 1822 2028 IPR011989 -
Phac2g03939 2153 MobiDBLite consensus disorder prediction 1 37 - -
Phac2g03939 2153 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 531 573 IPR000225 GO:0005515
Phac2g03939 2153 FunFam Coatomer beta subunit 1618 2031 - -
Phac2g03939 2153 Gene3D - 1180 1402 IPR011989 -
Phac2g03939 2153 SUPERFAMILY ARM repeat 656 993 IPR016024 -
Phac2g03939 2153 SUPERFAMILY ARM repeat 1020 1160 IPR016024 -
Phac2g03939 2153 Gene3D - 645 813 IPR011989 -
Phac2g03939 2153 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1382 1616 - -
Phac2g03939 2153 Pfam Armadillo/beta-catenin-like repeat 520 559 IPR000225 GO:0005515
Phac2g03939 2153 Pfam Armadillo/beta-catenin-like repeat 99 129 IPR000225 GO:0005515
Phac2g03939 2153 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2032 2153 - -
Phac2g03939 2153 SUPERFAMILY ARM repeat 1186 1569 IPR016024 -
Phac2g03939 2153 Gene3D - 814 1171 IPR011989 -
Phac2g03939 2153 ProSiteProfiles C2 domain profile. 2013 2130 IPR000008 -
Phac2g03939 2153 Gene3D - 1403 1697 IPR011989 -
Phac2g03939 2153 Gene3D - 1702 1821 IPR011989 -
Phac2g03939 2153 Gene3D - 410 644 IPR011989 -
Phac2g03939 2153 Gene3D - 43 409 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03939 Phac-Chr2 39245823 39257187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03939 491 615 U-box Gene Family AT3G46510 32.540 3.86e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03939 - - gmx:100794002 3816.16