Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03938 ATGGCCACCACACTCGCTTGGAGACACGCTGCCAACAATGCAAATGATCTGGAAAGAAATGGTGATAGGAATACTCAAGATTCAGAGCCCCCAACACCACATTCTGTTCTGAAGATGGGATTTAGAGAGCGCAACAGCAGCATGGAGGATCCAGATGGAACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCTTATTCTGTGCAAGAGAAAGAATATTCCTTAAGGCAGCTATTGGAGCTTATAGATATGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCAGGTCTGGTTCATTGAATGTGAAGATACAGGCAGCGACCGTCTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGGGTCAAGGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTAGTCTATTAAAGTCCAGTTCTACTGAAGGACAAATTGCTGCTGCAAATACTATTTATGCTGTCTCTCAGGGTGGTGTAAAGGATCATGTTGGTTCAAAAATATTTTCAACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGAAAACTGGCCTGAAGGCAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCCAGCAACACTGAGGGATTCTGGAATGCAACTATACGAGCTGGAGGAGTCGACATATTAGTGAAGTTACTGGCAAAAGCACAGCCCAGTAGTTTAGCTAATGTGTGCAATTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCGGAGGTGACAAAACAACTTCTGAAACTATTAGGCCCTGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAGGCAAGGCGAGAGATAGCCAATGCTAATGGTATTCCTTCTCTGATCAATGCTACCATAGCTCCTTCCAAAGAATTCATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGAGTGCTCTAGCAAACATCTCTGGTGGTTTGTCTTACGTCATATCTAGCCTTGGTCAAAGTCTTGAATCATGCACCTCACCTACCCAAATTGCTGACACATTAGGAGCTTTGGCATCAGCTCTCATGATATATGATAACAAGGCTGAATCAACCAGAGCATCAGATCCTTTGGTTGTCGAGCAGACATTACTCAAACAATTTGAGCCTCGCTTGCCCTTCCTTGTAAAGGAACGAACCATTGAAGCGCTTGCTAGTTTGTATGGAAATTCCGTACTTTCAAATAAACTTGCAAATGCCGATGCAAAACATCTGCTAGTTGGTTTGATAACAATGGCTGCAAATGACGTGCAAGACGAACTTATAAAAGCTCTGTTGACAGTGTGCAAAAGTGAAGGCAGTCTATGGCGTGCACTTCAGGGCCGTGAAGGAGTTCAACTATTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAGCAAGAGTGTGCAGTTGCCCTGCTTTGCCTTCTATCATTTGAAAATGATGAAAGTAAATGGGCAATTACTGCAGCTGGTGGCATACCTCCACTTGTTCAAATTTTGGAGACAGGATCAGCAAAAGCAAAGGAAGATTCAGCAACAATCCTTAAGAACCTGTGCAATCATAGCGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAAGATATTGCTGCAAAGACTTTAAATCATTTAATTCATAAATCAGATACTACAACCATTAGTCAGCTTACAGCTTTATTGACTAGTGATCTTCCTGATTCTAAGGTTTATGTTTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGCGACATTTTACGTGAAGGTAGTGCTGCCAGCGATGCATTTGATACTATGATAATATTATTGAGCTCTGCCAGAGAAGAAACTCAGGCAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCTGTCAAAACTCTTTTGTCAGCCAAGAAATTGCTCAATGCTGAATCTGAAAGTATCCTGATTGAGTCCTCCCACTGCATGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTATCGCTAGAGATACATTATCCCCTCTAGTTTCACTAGCAAACTCTTCAGTTTTGGAAGTTGCAGAGATGGCCACATGTGCTCTGGCGAACCTTATTTTAGATGGTGAAATTGCAGAGAAAGCTATTGCAGAAGAAGTTATCTTATCTGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACTCATGCCGCAGCAGCAATTGCTCGCCTCCTACATTCTCGGGATGTTGATTATGCTGTAACTGATTGTGTAAATCGTGCTGGAACTGTTCTTGCATTAGTCTCTTTCTTAGATTCTGCTGTTAATGGATCTGTTGCTACATCAGAGGCTCTAGAAGCACTTGCCATCCTGTCCAGGTCGGTAGAGACCAGTGCAAATATTAAATCTGCTTGTGCTGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCTTGTGTATTGTTGATTCGGAGCCAATGTTGCAGGATAAAACTATTGAGATTTTATCTCGATTATGTAAGGATCAGCCTGTTGTTTTGGGAGATACTATTGTGTCAGCACCTGGATGCATATCTTCAATAGCTAAAAGAATAATTAGTTCCACAAATGTGAAGGTCAAAATTGGCGGAGCAGCACTTCTTATTTGTACTTCTAAAGCAAATCATCAGAGACTGGTGGAGGATCTGAGTTCGTCAAACTTGTGTGTCGATCTTATTCGATCTCTTGTTGATATTCTTGTTTCTGCCCTGCCTTCTTCGGGTTACCTGGATGATGACAACAAGGAACTCATTAGCATATGCAGGCACACAACAGAAGAGGCCAACAGTTCTGAATCCAACACTAGCACTAGCATTATCTGTGGTGTTGACTTGGCGCTATGGCTATTGTCTATTCTTGCTTGTAATGATGAAAAAAATAAAATTGCAATAATGGAGGCTGGAGCAATTGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCGCAATATTCTCAGATGGACTACAAAGAAGATAGAATAATGTGGATTCATGCTTTGTTGTTGGCAATATTATTTCAAAATAGAGATATCATTCGAGCACATCCAACTATGAAATCTATACCTGCACTTACCAGTTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATAGCTAGCCTTGTCTGTAATGGTAGCAGGGGAACACTCCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTCTTGTGCGTTATCCTGATCAAGTGGCACTTGAGAGGTTGTTTCGAGTTGAAGACATAAGAGTTGGAGCCACTTCTCGGAAGGCTATACCTGCCTTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCTGGGGCACCATTTTTGGCACTTGTACTTTTGACTCAGCTCAGTAAAGATTGTCCTTCAAATATGAGTGTAATGGTGGAGTCTGGGGCCTTAGAGGCACTTACGAAGTATCTTTCACTCAGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTTCTAGGAATTCTGTTTAGCAGTGCTGAAATACGAAGACATGAATCAGCATTTGGTGCTGTTGCTCAACTTGTAGCTGTGCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCTTTGGAAAGTCTGTTTTCTGCTGATCACATCAGAAATGCAGAGATTGCTCGGCAGGCTGTTCAACCATTGGTGGAGATTCTCAGTACTGGTTCAGAAAAGGAGCAGCATGCTGCCATTGCTGCATTAGTGGGGTTACTGAGTGAAAATCCATCAAGAGCTCTTGCTGTTGCAGATGTTGAGAAAAATGCAGTGGAAGTTCTTTGTAGGATCCTTTCATCAAATTCTTCAATGGACCTGAAAGGGGATGCTGCTGAATTATGTTGTGCTCTCTTTGGAAATACAAGGATTCGGTCCACAGCAGCTGCTGCAAGTTGTGTTGAACCTCTTGTCTCTCTCCTGGTATCTGAGTTCAGTCCAGCTCATATTTCAGTTGTCCGGGCACTGGATAGGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTAGTTGGCCTACTGTCTGGTACGAATTATATACTACATGAGGCCATTTCCAGAGCTCTAGTCAAGTTGGGAAAAGACAGGCCTGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCGTACTTGACATCTTACATGAAGCACCTGATTATCTATGTGCTACTTTTGCAGAATTGTTGCGTATATTGACTAATAATACTAGCATAGCTAAAGGTACATCTGCTGCTAAAGTGGTTGAACCATTGTTTTTGTTACTGACAAGGCAGGAATTTGGGCCAGATGGACAGCACAGTGCATTGCAGGTGTTGGTTAATATCTTAGAACATCCAAAGTGTCGTGCTGACCATTCATTAACTTCTCGCCAAGTTATTGAACCACTTATCCCTTTGCTTGATTCTCCAATTTCAGCTGTGCAACAATTGGCTGCTGAGCTTCTTTCACATCTACTTCTTGAAGAACGCCTTCAGAAGGATCCCGTGACACAGCAAGCAATTGGCCCTCTCATTCGAGTTCTTGGTTCTGGTATACACATATTGCAACAGAGAGCTGTAAAAGCCCTTGTTAGTATTGCACTAACATGGCCTAACGAAATTGCTAAGGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCTGATCCTTCCCTTCCTCATGCTTTATGGGAGTCTGCTGCCTCGGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTGCCCATTGCTGTATTGGTAAGGTTGCTTCGATCTGGCTCAGAGAGCACGGTTGTTGGTGCTTTAAATGCTCTTCTGGTGCTAGAAAATGATGATGGAACTAGTGCAGAAGCTATGTCAGAAAGTGGAGCTATAGAGGCTCTCTTGGAGCTCCTGCGATCTCATCAGTGTGAGGAAACTGCTGCAAGGCTTTTAGAAGTATTGCTGAACAATGTAAAGATTCGAGAAACAAAAGTAACAAAATCAGCTATCATACCATTATCGCAGTACCTTCTGGACCCACAAACTCAAGCTCAGCAAGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAGGGTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTAAATGTTCTTGAAGACCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAGAATCTTGTGATGTACAGTCGGTCAAATAGGAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTACTTGATCTGATAGGTTCAAGTAATCCAGAAACATCAGTTCAGGCTGCAATGTTTGTTAAACTTCTCTTCTCAAATAACACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCCATAACTGCTGCTATTGAAAAAGATTTATGGGCTTCTGGAACTGTGAATGACGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCAAGACTTAGAGCAACTGAACCAGCGACACTTAGCATTCCCCATCTAGTTACAGCCTTAAAGACAGGTTCAGAAGCTTGTCAGGAAGCAGCATTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCTAGAGCTCAGTCAATTGCAGCTGCAGATGCTATCCCATTGCTGCAGTACTTGATCCAGTCTGGGCCACCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTGCCAGGAACATTGGTAGTGATCATCAAACGTGGTAACAACATGAAGCAATCTGTTGGAAATCCAAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCCCCAAGGCAAACCCAGGTGGTTTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGACCTTTGAGAGTCCTCCCAAAGGCCAGAAGCTTCATATCTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTTGGATCAGTAGCAGGAGAGTACGCTTTGTTGCCTCAAAGTAAAAGTGGGCCGCCACGGAATCTAGAGATAGAATTTCAGTGGTCTAACAAGTGA 6441 0.4276 MATTLAWRHAANNANDLERNGDRNTQDSEPPTPHSVLKMGFRERNSSMEDPDGTLASVAQCIEQLRQSSYSVQEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLSLLKSSSTEGQIAAANTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLKTGLKAGNVVEGLLTGALKNLSSNTEGFWNATIRAGGVDILVKLLAKAQPSSLANVCNLLASVMMEDASVCSKVLTAEVTKQLLKLLGPGNDDSVRAEAAGALKSLSAQCKEARREIANANGIPSLINATIAPSKEFMQGECAQALQENAMSALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPLVVEQTLLKQFEPRLPFLVKERTIEALASLYGNSVLSNKLANADAKHLLVGLITMAANDVQDELIKALLTVCKSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSFENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSDILREGSAASDAFDTMIILLSSAREETQAKSASALAGIFETRKDVRESSIAVKTLLSAKKLLNAESESILIESSHCMAAIFLSIKENRDVAAIARDTLSPLVSLANSSVLEVAEMATCALANLILDGEIAEKAIAEEVILSATRILCEGTISGKTHAAAAIARLLHSRDVDYAVTDCVNRAGTVLALVSFLDSAVNGSVATSEALEALAILSRSVETSANIKSACAVLAEFPKSISPIVLCIVDSEPMLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIAKRIISSTNVKVKIGGAALLICTSKANHQRLVEDLSSSNLCVDLIRSLVDILVSALPSSGYLDDDNKELISICRHTTEEANSSESNTSTSIICGVDLALWLLSILACNDEKNKIAIMEAGAIDVLIDRISNCFSQYSQMDYKEDRIMWIHALLLAILFQNRDIIRAHPTMKSIPALTSLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALVLLTQLSKDCPSNMSVMVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRRHESAFGAVAQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVGLLSENPSRALAVADVEKNAVEVLCRILSSNSSMDLKGDAAELCCALFGNTRIRSTAAAASCVEPLVSLLVSEFSPAHISVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGTNYILHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCATFAELLRILTNNTSIAKGTSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPKCRADHSLTSRQVIEPLIPLLDSPISAVQQLAAELLSHLLLEERLQKDPVTQQAIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSESTVVGALNALLVLENDDGTSAEAMSESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAIIPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTSDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSNPETSVQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTALKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWDESFSWTFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK* 2147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03938 2146 Gene3D - 814 1175 IPR011989 -
Phac2g03938 2146 SUPERFAMILY ARM repeat 60 391 IPR016024 -
Phac2g03938 2146 SMART C2_3c 2026 2122 IPR000008 -
Phac2g03938 2146 SUPERFAMILY ARM repeat 1359 1686 IPR016024 -
Phac2g03938 2146 ProSiteProfiles C2 domain profile. 2006 2123 IPR000008 -
Phac2g03938 2146 Gene3D - 608 813 IPR011989 -
Phac2g03938 2146 Gene3D - 1815 2021 IPR011989 -
Phac2g03938 2146 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1375 1609 - -
Phac2g03938 2146 SUPERFAMILY ARM repeat 1179 1440 IPR016024 -
Phac2g03938 2146 Coils Coil 292 319 - -
Phac2g03938 2146 SUPERFAMILY ARM repeat 656 993 IPR016024 -
Phac2g03938 2146 Pfam Armadillo/beta-catenin-like repeat 520 559 IPR000225 GO:0005515
Phac2g03938 2146 Pfam Armadillo/beta-catenin-like repeat 99 129 IPR000225 GO:0005515
Phac2g03938 2146 MobiDBLite consensus disorder prediction 1 37 - -
Phac2g03938 2146 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 531 573 IPR000225 GO:0005515
Phac2g03938 2146 FunFam Coatomer beta subunit 1611 2024 - -
Phac2g03938 2146 Gene3D - 43 408 IPR011989 -
Phac2g03938 2146 SUPERFAMILY ARM repeat 1672 2023 IPR016024 -
Phac2g03938 2146 Gene3D - 1400 1690 IPR011989 -
Phac2g03938 2146 Gene3D - 1176 1399 IPR011989 -
Phac2g03938 2146 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2025 2146 - -
Phac2g03938 2146 SUPERFAMILY ARM repeat 1020 1154 IPR016024 -
Phac2g03938 2146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2025 2128 IPR035892 -
Phac2g03938 2146 CDD C2 2027 2117 - -
Phac2g03938 2146 Gene3D - 1695 1814 IPR011989 -
Phac2g03938 2146 Gene3D C2 domain 2023 2146 IPR035892 -
Phac2g03938 2146 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 24 2146 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Phac2g03938 2146 Pfam C2 domain 2025 2114 IPR000008 -
Phac2g03938 2146 SUPERFAMILY ARM repeat 422 728 IPR016024 -
Phac2g03938 2146 Gene3D - 421 607 IPR011989 -
Phac2g03938 2146 SMART arm_5 89 130 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1179 1222 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 562 602 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1564 1602 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 520 560 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1224 1265 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 477 518 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 728 766 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1434 1474 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1307 1347 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 306 355 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1393 1433 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1725 1764 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 131 171 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 812 854 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1852 1892 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 1476 1516 IPR000225 GO:0005515
Phac2g03938 2146 SMART arm_5 263 304 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03938 Phac-Chr2 39245823 39257187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03938 491 615 U-box Gene Family AT3G46510 32.540 3.95e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03938 - - gmx:100794002 3822.71