Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03923 ATGGAGGAGGAAGAGCATGAGGTGTACGGAGGAGAGATTCCCGACGAGGGTGAGATGGAAGGGGATGTTGACATGTCCGCCGCCGATGATGACGCCGCCGTCAAGGAGCTCGACGAGATGAAGCGCCGATTGAAGGAGATGGAAGAGGAAGCCGCAGCGCTTCGCGAGATGCAAGCTAAGGTCGAGAAGGAAATTGATCCTGCTAATGCAGCTGCTTCTCAGGCAAACAAGGAGGAGGCAGATTCTCGGTCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTTCAATCCTGTGGTACTGTTAACAGGGTCACTATCCTGACAGACAAGTTTGGCCAGCCTAAAGGTTTCGCTTATGTGGAATTTGTTGAAGTTGAAGCTGTTCAAGAGGCTATCCTCTTGAATGAATCTGAACTGCATGGCCGGCAACTGAAGGTTTTGCCTAAGAGGACCAATGTCCCTGGAATGAAACAACATCGTCCTAGACGGTTTAATCCTTACATGGCATATGGCTTCAGGAGGCCATATACTCCTCCTTACTTTTTCTCCCCTTATGGATATGGGAAGGTTCCTAGGTTTAGAAGGCCAAATCGTTACATGCCGTACTACTAG 636 0.489 MEEEEHEVYGGEIPDEGEMEGDVDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVEKEIDPANAAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPYMAYGFRRPYTPPYFFSPYGYGKVPRFRRPNRYMPYY* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03923 211 CDD RRM_II_PABPs 84 155 - -
Phac2g03923 211 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 153 IPR000504 GO:0003723
Phac2g03923 211 Coils Coil 30 64 - -
Phac2g03923 211 SMART rrm1_1 84 155 IPR000504 GO:0003723
Phac2g03923 211 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 159 IPR000504 GO:0003723
Phac2g03923 211 MobiDBLite consensus disorder prediction 1 23 - -
Phac2g03923 211 SUPERFAMILY RNA-binding domain, RBD 73 179 IPR035979 GO:0003676
Phac2g03923 211 Gene3D - 24 155 IPR012677 -
Phac2g03923 211 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 4 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03923 Phac-Chr2 39143261 39148989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03923 80 154 Eukaryotic Initiation Factors Gene Family AT2G36660 34.211 3.15e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03923 K14396 - gmx:100789721 369.392