Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03910 ATGCCTCCTCAGCCTAAAATCCCAGAATCTCACCATGGTACCCCAGCAGCTTCCCCTTTGAAATCAGTGAAGTTACCCATATATCCCGTAGAAGAACATCATAAACATGTTTTTCCACTAGCGTTGATTGTGACGGCATGCATAGTTGGCGTGTTCATGTTTCTGTTCACTGTGTCCACACTCATAAGGTACTTTTACTCCAGGAGATATAACCGCAACACAAATGGAACCAGAGACACGCCCATATTGTTCGATTTGAACGGAGATTCTCCCACTTCGGATAACGATAATGACGTGGACCAAGACGACATGGCGGCTGTCCACCATGTATGGTACATCCGCACCGTCGGTCTCCAACAATCGCTTATAGACTCCATCACCGTCTTCAAATACAGAAAAAACGAAGGAATCATAGACGGCTCCGAATGTTCCGTGTGCCTCGGAGAGTTCGAACACGACGACACTCTCAGGCTGTTGCCCAAGTGCAGCCACGCGTTCCACGTGCCTTGCATTGACACGTGGCTCCGGTCCCACAAAAACTGCCCCCTGTGCCGCGCACCCGTGGTCTGCGATGAAACTGGAGCCGTTGATCAGAATGTTCAGATGGATTCGAGCGTGTCTGATCATCAGAGTCAGAATCATGTGGTTCAGGTGGAGGATTCTGATGATGGGGTGGGATTAGAAGGTGGTGGTGGTTCTGGTGAGTCCTCTGGCGGAATAGAAACACAGCCTCTGAGGAGATCGGTTTCGATGGATTTTTCTTCTGCTTCAAATTCAATGGTGTCTCGTGATGTGGGGGTGGATATAGACACCCCTTATGGCGAAAAAGTGAGTTCGAGTAACAAGGGCATGATTCATATGAGTATTATTGAGAAACATGGAAGTGGGAGTTCGTGTTCGAGTTCAAGTTCAAGTACCATTCACAAGTTGGCTTCAGTTGGACGTGCGTTGCAAAAGGGTCCAGTCTCAATGAGACGATCGTTTTCACATAACAGGAAATTTTTGTTCTCCACACACTCCAGGAGTCAGAGTTCTACTCTTCCAATATAA 1050 0.4781 MPPQPKIPESHHGTPAASPLKSVKLPIYPVEEHHKHVFPLALIVTACIVGVFMFLFTVSTLIRYFYSRRYNRNTNGTRDTPILFDLNGDSPTSDNDNDVDQDDMAAVHHVWYIRTVGLQQSLIDSITVFKYRKNEGIIDGSECSVCLGEFEHDDTLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVVCDETGAVDQNVQMDSSVSDHQSQNHVVQVEDSDDGVGLEGGGGSGESSGGIETQPLRRSVSMDFSSASNSMVSRDVGVDIDTPYGEKVSSSNKGMIHMSIIEKHGSGSSCSSSSSSTIHKLASVGRALQKGPVSMRRSFSHNRKFLFSTHSRSQSSTLPI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03910 349 CDD RING-H2_EL5-like 142 185 - -
Phac2g03910 349 MobiDBLite consensus disorder prediction 221 244 - -
Phac2g03910 349 SMART ring_2 143 184 IPR001841 -
Phac2g03910 349 FunFam RING-H2 finger protein ATL54 118 191 - -
Phac2g03910 349 SUPERFAMILY RING/U-box 128 191 - -
Phac2g03910 349 Pfam Ring finger domain 142 185 IPR001841 -
Phac2g03910 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 193 IPR013083 -
Phac2g03910 349 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Phac2g03910 349 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 37 192 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03910 Phac-Chr2 38979889 38981658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03910 108 189 C3H Transcription Factor Family AT5G10380 75.610 1.89e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03910 - - gmx:102663026 374.4