Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03909 ATGCAGTCTCCACCTTCTATTCAAATCTCCCTACTCCAACAACAACAACATCGTCATCATCATGTACATGTACATGCAAATGCTCCTCTCTTTTTTCTTAACTCTCCCCTTCTCTTCCTCTCCCATTATTTCAATGCCCTCATGGGAAAAACCAAAATTTTCAATTTTTTTGCCAATGGCACCAGTAATTACATGCTTCCTACCTCCAATACTATAAGGCAGACTCTTTTAAACCGGCCAAGTTCCCACAAAGACTGCTTTCCCTTTTCACGCTTTGGATTCTTGCGCCGCTTCATTCCTTCAAGAAAAGTTGATGGGGGCTCAAAAACTGAGGATGAGGAGAAAGTCTACTCTTGGTTATACACCTTGGCTCAGACTGATAAGAACTTGGTCTTTGAGTACGTTAGGTCCACTGAAAGAGGCTTAAGCTTCACAGAAGCAGAGAGGAGACTTCGGGAAAATGGGCCAAATGTTCCACTTGAGTATTCCTTTCCAAGATGGTGGCATCTTCTACGGAATGCTCTTTTCCACCCTTTTAATATCATTCTGATTGTTTTGTCAGTTATGTCATTCATTGCCCGTGACAGTCCAAATGGATTTATCATGTTCGTGCTCGTTTTCATCAGTGTCACCCTCCGTTTCTATCAGGAGTACAGCAGCTCAAAAGCAGCAATGAAGCTTTCAGAATTTGTAAAATGTCCAATAAAAGTTCAAAGATGCGCTGGTAGAGTTGTTCAGAAAGAACTTGTTGTTCAAGTTGATCACAGGGATGTAGTTCCAGGTGACATTTTAATTTTTGAACCTGGAGATCTCTTTCCTGGAGATATCAGATTGTTATCTTCTAAGCAACTTGTTGTGAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGACAAAACTGCTGATATCAGAGAAGACTACTCTACTCCTTTATTGGATTTAAAAAACATCTGTTTTATGGGCACAAACGTGGTATCAGGTACTGGAACAGGCCTAGTGGTTTCAACTGGATCAAATACTTACATGAGCACCATGTTTTCAAAAGTTGGGAAGAAGAAGCCACCAGATGAATTTGAAAAGGGTCTCAAATGGATATTTTACTTGCTTATTTCTGTTATGCTAGTAGTTGTTACCACCATGTTTGTGGTAAATTACATGACATCTCTTGATTTGACCCAAAGCGTTCTTTTTGCCATCTCTGTTGCATCTGTCCTGAATCCTCAGATGCTTCCCCTCATCGTTAACACATGCCTTGCAAAAGGAGCACTTGCTATGGCTAAAGACAGGTGTATAGTAAAGAGTTTAAGATCTATACGCGACATGGGATCAATGGATATTCTTTGTATTGACAAGACAGGCTCCCTTACAATGAATCATGCAATCATGGTTAATCATCTTGACTGCATGGGTTTACCCCAAGAAAAAGTTTTACGCTATGCCTTCCTCAACTCTTACTTTAAGACTGATCAGAAGTATCCTCTAGATGATGCTATTCTGGCATTTGTATATTCAAATGGATTCAGGTTTCGGCCATCTAAGTGGAGGAAGATAGATGAGATTCCCTTTGACTTCATAAGAAGAAGAGTATCTGTCATCTTAGAAACAGAAGACAGACAGTCACAATTCTTTGGCAGGTTCATGGTAACAAAAGGAGCACTATTAGAAGTATTGAAAGTTTGTTCTTTCATTGAGAATTTCGATAAAGATGAAATTTGCCTCTTCTCTTCTGATGATTATCAGCGTATTTTAAATCTTTCAGAAGATATTAGCAATGAAGGGTTAAGGATTCTGGGAGTAGCTATAAGGAAGCTTGAAATGCCACAAACATGTGAAACAAGTAATGGAAGCAAGAGAGAAGACGAGGATATCGAAAAAGACATGGTGTTCCTTGGCCTCATAACGTTTTTCGACCCACCTAAGGACACAGCAAAGCAAGCACTGTGGCGTTTGTGTGAGAAGGGAGTGAAAGCAAAGGTTTTAACAGGTGATTCCCTCTCCTTGACAACGAGGGTATGCAGGGAAGTTGGCATAAGCACCAATCATGTAATAACAGGTCCTGAACTAGAGCTACTTGATCAAGACACGTTCCATGAGACAGTTAAAAGAGCCACAGTACTAGCACGTCTCACTCCAATTCAGAAACTCCATGTGGTGCAATCCTTGCAAACAGTTGGAAACCATGTTGTTGGGTTCTTAGGAGATGGAGTGAATGATTCACTGGCTTTAGATGCAGCAAATGTAAGCATTTCTGTGGATTCAGGAGTGGCCATTGCAAAGGACATGGCAGATATTATCTTACTTGAGAAAGACCTCAATGTGCTTGTTGCGGGAGTGGAGCATGGCAGACTCACTTTTGGCAACACAATGAAGTATGTTAAGATGTCAGTCATTGTTAACTTGGGAAGTGTCATTTCACTCCTCATAGCAACACTGCTGTTCAAGTATGAGCCCCTAACTTCTAGACAGCTTCTTACTCAGAATTTCATCTACAGTGTGGGACAGATTGCCATTGCCTGGGACAAGATGGATGAAGAGTATGTTAAGACACCTCACAAGTCCTCAGAAAGAGGCTTGTTCATGTTCATATTGTGGAATGGATCAGTGTGCACTCTGTGTGATGTGGCAACACTCATGCTTCTTTGGTTTTATTACAAGGCTTACACTGATATGACTCAGAAGTTTTTCCATTCAGCTTGGTTCATTGAAGGTCTCCTCTTGCAGACCCTCATCATCCACTTGATCAGAACAGAGAAAATCCCTTTCATACAGGAGGTTGCATCTTGGCCTGTGATTTTCTCTACTGTTCTGACTTCTGCAATTGGGATTGCACTTCCTTTCACACCCATTGGGAAGGTCATGGGATTCTCCCTTCTGCCTCTCTCATATTTCGGATTTTTGCTACTTCTTTTTCTTGGATATTTTGTAGTTGGCCAGGCAGTTAAGAGATTTTACATATTGGTTTATAAGAAATGGCTTTGA 2982 0.4098 MQSPPSIQISLLQQQQHRHHHVHVHANAPLFFLNSPLLFLSHYFNALMGKTKIFNFFANGTSNYMLPTSNTIRQTLLNRPSSHKDCFPFSRFGFLRRFIPSRKVDGGSKTEDEEKVYSWLYTLAQTDKNLVFEYVRSTERGLSFTEAERRLRENGPNVPLEYSFPRWWHLLRNALFHPFNIILIVLSVMSFIARDSPNGFIMFVLVFISVTLRFYQEYSSSKAAMKLSEFVKCPIKVQRCAGRVVQKELVVQVDHRDVVPGDILIFEPGDLFPGDIRLLSSKQLVVSQASLTGESWTTDKTADIREDYSTPLLDLKNICFMGTNVVSGTGTGLVVSTGSNTYMSTMFSKVGKKKPPDEFEKGLKWIFYLLISVMLVVVTTMFVVNYMTSLDLTQSVLFAISVASVLNPQMLPLIVNTCLAKGALAMAKDRCIVKSLRSIRDMGSMDILCIDKTGSLTMNHAIMVNHLDCMGLPQEKVLRYAFLNSYFKTDQKYPLDDAILAFVYSNGFRFRPSKWRKIDEIPFDFIRRRVSVILETEDRQSQFFGRFMVTKGALLEVLKVCSFIENFDKDEICLFSSDDYQRILNLSEDISNEGLRILGVAIRKLEMPQTCETSNGSKREDEDIEKDMVFLGLITFFDPPKDTAKQALWRLCEKGVKAKVLTGDSLSLTTRVCREVGISTNHVITGPELELLDQDTFHETVKRATVLARLTPIQKLHVVQSLQTVGNHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIVNLGSVISLLIATLLFKYEPLTSRQLLTQNFIYSVGQIAIAWDKMDEEYVKTPHKSSERGLFMFILWNGSVCTLCDVATLMLLWFYYKAYTDMTQKFFHSAWFIEGLLLQTLIIHLIRTEKIPFIQEVASWPVIFSTVLTSAIGIALPFTPIGKVMGFSLLPLSYFGFLLLLFLGYFVVGQAVKRFYILVYKKWL* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03909 993 Gene3D - 233 337 - -
Phac2g03909 993 SUPERFAMILY Calcium ATPase, transmembrane domain M 137 990 IPR023298 -
Phac2g03909 993 SUPERFAMILY Calcium ATPase, transduction domain A 243 348 IPR008250 -
Phac2g03909 993 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 444 640 IPR023299 GO:0000166
Phac2g03909 993 Pfam haloacid dehalogenase-like hydrolase 603 747 - -
Phac2g03909 993 NCBIfam HAD-IC family P-type ATPase 202 489 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac2g03909 993 NCBIfam HAD-IC family P-type ATPase 699 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac2g03909 993 SUPERFAMILY HAD-like 624 781 IPR036412 -
Phac2g03909 993 Gene3D - 198 945 - -
Phac2g03909 993 NCBIfam magnesium-translocating P-type ATPase 114 992 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 SMART Cation_ATPase_N_a_2 122 195 IPR004014 -
Phac2g03909 993 Pfam Cation transporter/ATPase, N-terminus 133 190 IPR004014 -
Phac2g03909 993 Gene3D - 446 770 IPR023214 -
Phac2g03909 993 Gene3D - 461 637 IPR023299 GO:0000166
Phac2g03909 993 PANTHER CATION TRANSPORTING ATPASE 128 983 - -
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 861 877 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 896 917 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 841 854 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 946 967 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 362 378 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 379 398 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 791 806 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 PRINTS Magnesium-transporting ATPase signature 483 496 IPR006415 GO:0015444|GO:0015693|GO:0016020
Phac2g03909 993 Pfam E1-E2 ATPase 243 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03909 Phac-Chr2 38964590 38970232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03909 140 885 Primary Pumps ATPases(2) AT1G10130 26.235 4.78e-63 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03909 K01531 - pvu:PHAVU_002G260400g 1826.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03909 2 38964590 38970232 Phac2g03909 2 38964590 38970232 ECH