Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03888 ATGTCCAAACCCTGGGGCAACATCGGAGCTTGGGCAGCGGATTCCGAGCGGGCCGAGGCAGAGGAGCGCGAGGCCCAGGATGCGGCCGCGGCCGCCGAGACGCAAAACTTCCCCAGCCTCAAGGAGTCCGTCAACTCCAAGCCCAAGAAGAAGAAGGGCACCACCATCACGCTCTCTGAGTTCAACCGAGGCGGTTTCGCCTCTGCCGGCGAGCACCAGGGCCTCACACGCGACGAGATGATGGCGCTTCCGACCGGTCCCAAGGAGCGCTCCGCCGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCTTCCTATGACCGCTCCGGAGGTCGCTCGCGCGACCGCGACGGCGGAAACAACGACGGCTCTTGGGGAGGCGGCGGGAGAAGATCCTACGGCGGATTCGACGAGGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTCGACAATTGGGCGTCCGTGAAGAAATCTGTCCCCGCGTATGATTCTGGCCGGCAAAATCGCTATGCTGGAGGTGGTGGTGGCTTTGGCACCGGTGGCGGCGGTGGCGGTTTTGGTGGCGGAGGTGGAGGTGGCGGTGGCGGTTTTGGTGGTGGAGGTGGCGGTGGTTTTGGTGGTGCGTCTAGGTCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGCCTGTTCCTGTTAGATCTTCCAATTTTGGTTCAGGTTTTCGTGATTCCGGCGTGGAGCCTGATCGTTGGTCGAGAGGTGGTCCACCGCGTGAGACGGAGCGGATGGAGCGGCCGAGGCTGGTATTGGATCCGCCGAGGGTCGATGGTTCGGTGAATGAGGCTCCTGTGAAGGCGACAAATAAGGGCAATCCGTTCGGCGCGGCGAGGCCCAGGGAGGAGGTGTTGGCTGAGAAGGGATTAGATTGGAAGAAGATGGATTCAGAGATTGAGGCGAAGAAGACGAGCCGGCCCACGAGTTCTCACTCTAGCAGGCCTTCCAGTGCTCAGTCCAATCGTTCTGAGGGTCCCGGGTTGCAGGGGGTCGATGCTGTGCCGAAATCGAGACCCAAGTTGAATCCGTTTGGGGATGCCAAGCCCAGGGAGGTTCTGTTGGGCGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGATTTGGAGCATCGCTCTGTTGACAGGATTTCGAGTATACTTGATAACTTGCACGAGCTTGCAAGCTTGGTGTTGCAGAGCTGA 1251 0.5979 MSKPWGNIGAWAADSERAEAEEREAQDAAAAAETQNFPSLKESVNSKPKKKKGTTITLSEFNRGGFASAGEHQGLTRDEMMALPTGPKERSAEEMQFNRLGGGFSSYDRSGGRSRDRDGGNNDGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSVPAYDSGRQNRYAGGGGGFGTGGGGGGFGGGGGGGGGGFGGGGGGGFGGASRSDGVDNWAVGKKPVPVRSSNFGSGFRDSGVEPDRWSRGGPPRETERMERPRLVLDPPRVDGSVNEAPVKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGPGLQGVDAVPKSRPKLNPFGDAKPREVLLGERGMDWRKIDLDLEHRSVDRISSILDNLHELASLVLQS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03888 416 MobiDBLite consensus disorder prediction 1 373 - -
Phac2g03888 416 Pfam Plant specific eukaryotic initiation factor 4B 1 399 IPR010433 GO:0003743
Phac2g03888 416 Coils Coil 15 35 - -
Phac2g03888 416 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 359 397 IPR010433 GO:0003743
Phac2g03888 416 MobiDBLite consensus disorder prediction 331 349 - -
Phac2g03888 416 MobiDBLite consensus disorder prediction 251 276 - -
Phac2g03888 416 MobiDBLite consensus disorder prediction 304 330 - -
Phac2g03888 416 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03888 Phac-Chr2 38880260 38887087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03888 1 398 Eukaryotic Initiation Factors Gene Family AT3G26400 55.288 8.37e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03888 - - gmx:100784238 516.153