Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03881 ATGTTGGGAGAAGAGAGTAACAACGCCGACACCGGTGTTCACTGGAGAGCACATTCCAGATCAGTTTCCTGGACCGACCAGACTCCGGTGACTCGGAAACCGCCGCGATCCCTTCAGCCTCTTTGCATCAGAAAACACAGCGTGAAGGAGTGGCCGAGCGCCGGCACCGACGATCTCGAGGATTGGCTTCCACCACCGACCCCAAGAGGGTCCACCAAAGGATCATCAAATTTGGGTTCGGGTTCGGGTCATGTTTTTCAGCTTAGGAGAGACAAGTTAGCTTTCTTCGACAAGGAATGTTCCAAAATCGCGGAGCACGTGTACTTGGGGAGTGACACGGTGGCAAAGAACGAGGAGGTTTTGCGGCGGCACGGGATAACGCACGTGCTGAATTGCGTGGGGTTCGTTTGCCCCGAGTATTTCAAAAGCAACTTCATCTACAAAACTCTATGGCTGCGGGACAGTCCCTCGGAGGACATCACCAGCATTCTCTACGACGTTTTCGATTACTTCGAGGATGTCCGACAACAGGGTGGGCGCGTGCTTGTGCACTGCTGCCAGGGCGTGTCGCGTTCGACCTCCTTGGTCATCGCGTATCTCATGTGGAGGGAGAGCCAGAGCTTCGAGGACGCGTTTCACTTCGTGAAGAACGCGCGTGGCATCACCAATCCGAACATGGGTTTTGCGTGTCAGCTATTGCAGTGTCAGAAGCGCGTGCATGCTATGCCTCCGAGTCCTAGTTCCGTGCTGAGGATGTATAGGATGGCTCCTCATTCTGCCTACGACCCTCTTCACCTTGTTCCTAAGATCGTTAACCACCCTTGCGCCCACGCGCTTGATTCGCGTGGGGCGTTTATTGTGCATGTTCCTTCTACTTTATACGTGTGGGTTGGGAAGGAGTGTGGCACGGTGATGTGTTGCAAGGCGCGTTATGCAGCTGCTCAGGTTGTTCGATACGAGAGGGCAACTGGGGAGATTGTTGGTGTGGTTGAGGATGAAGAACCTAAGGAGTTTTGGGTTGCTCTTTCTAACAAGGAAGTGTTGGTGGAGGATGAAGAAGAGGTGAAGAACGTGGAAAAAATGCAGGTTGATGTGGGGCTTCATCCCCGAAGAGTTGAGGACTATGATTTGGACTTTGGAATTTTTCATAAGGCACTTGCAGGTGGGGTTGTTCCACCTTTTTCTTTCTCTAATGCCGGATCAGAAAATTGCCTCCCTTCTAAGGAAAATGGTTGGGGGAGATTGAGTAGGAAGGTTTCACATTGA 1266 0.5221 MLGEESNNADTGVHWRAHSRSVSWTDQTPVTRKPPRSLQPLCIRKHSVKEWPSAGTDDLEDWLPPPTPRGSTKGSSNLGSGSGHVFQLRRDKLAFFDKECSKIAEHVYLGSDTVAKNEEVLRRHGITHVLNCVGFVCPEYFKSNFIYKTLWLRDSPSEDITSILYDVFDYFEDVRQQGGRVLVHCCQGVSRSTSLVIAYLMWRESQSFEDAFHFVKNARGITNPNMGFACQLLQCQKRVHAMPPSPSSVLRMYRMAPHSAYDPLHLVPKIVNHPCAHALDSRGAFIVHVPSTLYVWVGKECGTVMCCKARYAAAQVVRYERATGEIVGVVEDEEPKEFWVALSNKEVLVEDEEEVKNVEKMQVDVGLHPRRVEDYDLDFGIFHKALAGGVVPPFSFSNAGSENCLPSKENGWGRLSRKVSH* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03881 421 Gene3D Protein tyrosine phosphatase superfamily 86 241 IPR029021 -
Phac2g03881 421 Pfam Dual specificity phosphatase, catalytic domain 107 237 IPR000340 GO:0008138|GO:0016311
Phac2g03881 421 SUPERFAMILY Actin depolymerizing proteins 245 349 - -
Phac2g03881 421 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 242 IPR029021 -
Phac2g03881 421 SMART VILL_6 254 345 IPR007122 GO:0051015
Phac2g03881 421 MobiDBLite consensus disorder prediction 69 83 - -
Phac2g03881 421 CDD DSP 100 234 - -
Phac2g03881 421 ProSiteProfiles Dual specificity protein phosphatase domain profile. 99 241 IPR020422 GO:0006470|GO:0008138
Phac2g03881 421 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 158 219 IPR000387 GO:0016311|GO:0016791
Phac2g03881 421 Gene3D Severin 251 348 IPR029006 -
Phac2g03881 421 ProSitePatterns Tyrosine specific protein phosphatases active site. 183 193 IPR016130 GO:0016311|GO:0016791
Phac2g03881 421 SMART dsp_5 99 238 IPR020422 GO:0006470|GO:0008138
Phac2g03881 421 MobiDBLite consensus disorder prediction 52 83 - -
Phac2g03881 421 MobiDBLite consensus disorder prediction 20 34 - -
Phac2g03881 421 MobiDBLite consensus disorder prediction 20 39 - -
Phac2g03881 421 PANTHER MKPA PROTEIN 31 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03881 Phac-Chr2 38858705 38860527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03881 34 135 Protein tyrosine phosphatase (PTP) family AT3G55270 49.091 1.06e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03881 - - pvu:PHAVU_002G259000g 844.728