Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03854 ATGCCAGTAGAAATGGGCTTCTTTTTTGTGTTATTGCTATTGGGTTGCTTATGTTCTTTTGTGTTTCCTGACATGCAAGGAGATGCACTATTTGCATTGAAGATATCATTGAATGCTTCAGCTCACCAACTTACTGACTGGAATCAAAATCAAGTGAATCCTTGTACTTGGTCACGTGTTTACTGTGACTCAAACAACAATGTCATTCAAGTATCACTAGCATATATGGGATTCACAGGATACTTGACCCCAAGAATAGGAGTTCTAAAATATGTCACAGCTCTTTCTTTGCAAGGGAATGGCATCACTGGCAGCATACCAAAAGAGATAGGAAACATGACAAGCTTGTGCAGGTTGGATTTGGAAATCAATAAATTAACTGGAGAAATACCTTCTTCCCTTGGTAATCTTAAAAAGCTTCAGTTCTTAACATTGAGTCAAAACAATCTGAGTGGGACTATTCCTGAATCGCTTGCCACTCTTCCAATGTTGATCAATGTTATGCTAGATTCAAATAATCTGAATGGCAAAATCCCAGAGCGGTTATTTGAGGTTTCTAAATACAATTTCACTGAAAATAATTTGGATTGTGGTGTGAATTATCATCAACTTTGCGAATCTTATAATGCAGATCAAGGTTCATCACACAAACAGAAAACTGGCCTTGTAGTTGGAATTGTTATAGGGTTAGTTGTTATCCTTTTCCTTGGTGGTCTGATGTTCTTTTGGTGCAAGGGTAGACACAAGGGCTACAGGCGTGAAGTTTTTGTAGATGTTGCAGGGGAAGTTGATAGGCGAATTGCATTTGGTCAGCTAAAAAGATTTGCATGGAGAGAACTACAGATAGCTACAGACAACTTCAGTGAGAAGAATGTTTTAGGACAGGGAGGCTCTGGAACGGTTTATAAAGGTGTTCTTGCTGATAACACAAAAGTTGCTGTCAAAAGGTTAACTGATTATGAAAGTCCTGGGGGAGATGCAACCTTTCAGCGTGAGGTTGAGATGATAAGTGTAGCTGTGCATAGGAACCTGTTACGGTTGATTGGGTTTTGTACTACCCCGACGGAGCGCCTCTTGGTTTATCCCTTTATGCAGAACTTAAGTGTTGCCTATCGACTTCGAGAACTCAAACCTGGTGAACCTGTTCTGGACTGGCCTACTAGAAAACGAGTGGCCCTGGGAACGGCCCGAGGCTTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTAGATGAAGATTTTGAAGCTGTTGTTGGTGATTTTGGCCTGGCAAAGTTAGTTGATGTTCGAAAAACCAACGTGACAACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCAGAATATTTGTCCACTGGAAAATCTTCGGAAAGGACTGATCTTTTTGGATATGGGATTATGCTGTTGGAGCTTGTTACAGGTCAACGAGCAATTGACTTTTCACGATTAGAAGAGGAAGATGATGTGCTGTTACTTGACCATCCGGTCATAGTTGCTCGACCTAAAGAGTATATCATTATCCCTCTTGACATGAGTAATCGCTGTAGTGAGCCAAGGAAGTTCGTGTAG 1605 0.4093 MPVEMGFFFVLLLLGCLCSFVFPDMQGDALFALKISLNASAHQLTDWNQNQVNPCTWSRVYCDSNNNVIQVSLAYMGFTGYLTPRIGVLKYVTALSLQGNGITGSIPKEIGNMTSLCRLDLEINKLTGEIPSSLGNLKKLQFLTLSQNNLSGTIPESLATLPMLINVMLDSNNLNGKIPERLFEVSKYNFTENNLDCGVNYHQLCESYNADQGSSHKQKTGLVVGIVIGLVVILFLGGLMFFWCKGRHKGYRREVFVDVAGEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGSGTVYKGVLADNTKVAVKRLTDYESPGGDATFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEPVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDLFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHPVIVARPKEYIIIPLDMSNRCSEPRKFV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03854 534 SMART serkin_6 287 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03854 534 FunFam Somatic embryogenesis receptor-like kinase 1 364 527 - -
Phac2g03854 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Phac2g03854 534 Pfam Protein kinase domain 288 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03854 534 SUPERFAMILY Protein kinase-like (PK-like) 267 501 IPR011009 -
Phac2g03854 534 SUPERFAMILY L domain-like 29 189 - -
Phac2g03854 534 FunFam Putative LRR receptor-like serine/threonine-protein kinase 23 207 - -
Phac2g03854 534 FunFam Somatic embryogenesis receptor kinase 1 256 363 - -
Phac2g03854 534 ProSiteProfiles Protein kinase domain profile. 287 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03854 534 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Phac2g03854 534 Gene3D Ribonuclease Inhibitor 24 207 IPR032675 -
Phac2g03854 534 Gene3D Transferase(Phosphotransferase) domain 1 364 529 - -
Phac2g03854 534 Gene3D Phosphorylase Kinase; domain 1 256 363 - -
Phac2g03854 534 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Phac2g03854 534 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 503 - -
Phac2g03854 534 Pfam Leucine rich repeat 92 150 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03854 Phac-Chr2 38726385 38737697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03854 4 514 Receptor kinase-like Gene Family AT5G10290 75.734 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phac2g03854 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03854 - - gmx:100793416 916.376