Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03850 ATGCCAAACACCACTCAACATTTCCCAAACAACAACAACATCAACTTCCCAAACGATTCCCTGCATGTGTCCCTTCGCAACCTCTCCCAACTCAGCACCCGAATGGATTCGCTTCAAACCTTTGTCTCCCAATCTATTCAATCCCACACTCTCCTCACACACCACCAAATGAACATCGTATCCAACGAGATCCTAACCGCAATTCGCCACGTCATCACCAACGGCGCAGCCTTAGTCGCCGCCTCCGAGAACGTGCTTCCGCTTTCGGACAGTCCAACGTCGGACTCTCCCAACCTAAACAGCGACGAAACAAGCGTGGTGGAGCTGGACGCGATGGAACTCCTGGTGCAGCACCTCCATTTCTGCGAGGTGTGCGGGAAAGGCTTCACGCGCGACGCCAACCTTAGGATGCACATGCGCGCCCACGGGGACGAGTTCAAGACTCCGGACGCGCTCGTGAGCAGGGCGCGTGGCGAGACGCGCACGAAGGCAACGCGGTTCTCGTGCCCCTTCGAAGGATGCAACCGAAACAAGACGCACAAGAAGTTCAGGCCGTTGAAGTCAGTGCTCTGTCTGAGGAATCACTTCAAGAGGAGCCACTGTCCCAAAACGCTGTCGTGCGAGCGGTGTCGGAAGAAGAGCTTCGCAGTGCTTTCGGACTTGAGGAGTCACGAGAAGCAGTGTCGTGGAGAGGCCACGTGGAAGTGCTCGTGCGGAAACACGTTTTCTCGGAAGGACAAGCTGTTCGGACACGTGGCGCTGTTCGAGGGGCATTTGCCGATGCTTGAAGAGGAGAAGGAGACATCTGTGGTGGCGGCGGCGGCGGCGAAAGGGTTGGTGAAGGAAAATGACGGTGGTTTGGATGGGTTACCTGAAGGGTTCTTTGATGGGTTGGATGAATTTGGGTTTGGTTCCTCTGAAATCACCTCTTCACCGGAGGAAACTTGGCCGGCATTGAGGCTTCCCACAAATAATTTAAATGGAAACTCTCATTTCTAA 999 0.5475 MPNTTQHFPNNNNINFPNDSLHVSLRNLSQLSTRMDSLQTFVSQSIQSHTLLTHHQMNIVSNEILTAIRHVITNGAALVAASENVLPLSDSPTSDSPNLNSDETSVVELDAMELLVQHLHFCEVCGKGFTRDANLRMHMRAHGDEFKTPDALVSRARGETRTKATRFSCPFEGCNRNKTHKKFRPLKSVLCLRNHFKRSHCPKTLSCERCRKKSFAVLSDLRSHEKQCRGEATWKCSCGNTFSRKDKLFGHVALFEGHLPMLEEEKETSVVAAAAAKGLVKENDGGLDGLPEGFFDGLDEFGFGSSEITSSPEETWPALRLPTNNLNGNSHF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03850 332 SMART c2h2final6 120 142 IPR013087 -
Phac2g03850 332 SMART c2h2final6 167 200 IPR013087 -
Phac2g03850 332 FunFam B-cell CLL/lymphoma 6, member B 119 142 - -
Phac2g03850 332 Gene3D Classic Zinc Finger 159 256 - -
Phac2g03850 332 SUPERFAMILY beta-beta-alpha zinc fingers 119 144 IPR036236 -
Phac2g03850 332 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 94 271 IPR044300 GO:0010044|GO:0010447
Phac2g03850 332 MobiDBLite consensus disorder prediction 308 332 - -
Phac2g03850 332 Pfam Zinc-finger of C2H2 type 121 140 - -
Phac2g03850 332 Gene3D Classic Zinc Finger 120 142 - -
Phac2g03850 332 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Phac2g03850 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03850 Phac-Chr2 38719284 38720424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03850 98 290 C2H2 Transcription Factor Family AT1G34370 50.754 3.56e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac2g03850 zf-met 0.0014 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03850 - - vum:124823301 521.161