Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac2g03850 | ATGCCAAACACCACTCAACATTTCCCAAACAACAACAACATCAACTTCCCAAACGATTCCCTGCATGTGTCCCTTCGCAACCTCTCCCAACTCAGCACCCGAATGGATTCGCTTCAAACCTTTGTCTCCCAATCTATTCAATCCCACACTCTCCTCACACACCACCAAATGAACATCGTATCCAACGAGATCCTAACCGCAATTCGCCACGTCATCACCAACGGCGCAGCCTTAGTCGCCGCCTCCGAGAACGTGCTTCCGCTTTCGGACAGTCCAACGTCGGACTCTCCCAACCTAAACAGCGACGAAACAAGCGTGGTGGAGCTGGACGCGATGGAACTCCTGGTGCAGCACCTCCATTTCTGCGAGGTGTGCGGGAAAGGCTTCACGCGCGACGCCAACCTTAGGATGCACATGCGCGCCCACGGGGACGAGTTCAAGACTCCGGACGCGCTCGTGAGCAGGGCGCGTGGCGAGACGCGCACGAAGGCAACGCGGTTCTCGTGCCCCTTCGAAGGATGCAACCGAAACAAGACGCACAAGAAGTTCAGGCCGTTGAAGTCAGTGCTCTGTCTGAGGAATCACTTCAAGAGGAGCCACTGTCCCAAAACGCTGTCGTGCGAGCGGTGTCGGAAGAAGAGCTTCGCAGTGCTTTCGGACTTGAGGAGTCACGAGAAGCAGTGTCGTGGAGAGGCCACGTGGAAGTGCTCGTGCGGAAACACGTTTTCTCGGAAGGACAAGCTGTTCGGACACGTGGCGCTGTTCGAGGGGCATTTGCCGATGCTTGAAGAGGAGAAGGAGACATCTGTGGTGGCGGCGGCGGCGGCGAAAGGGTTGGTGAAGGAAAATGACGGTGGTTTGGATGGGTTACCTGAAGGGTTCTTTGATGGGTTGGATGAATTTGGGTTTGGTTCCTCTGAAATCACCTCTTCACCGGAGGAAACTTGGCCGGCATTGAGGCTTCCCACAAATAATTTAAATGGAAACTCTCATTTCTAA | 999 | 0.5475 | MPNTTQHFPNNNNINFPNDSLHVSLRNLSQLSTRMDSLQTFVSQSIQSHTLLTHHQMNIVSNEILTAIRHVITNGAALVAASENVLPLSDSPTSDSPNLNSDETSVVELDAMELLVQHLHFCEVCGKGFTRDANLRMHMRAHGDEFKTPDALVSRARGETRTKATRFSCPFEGCNRNKTHKKFRPLKSVLCLRNHFKRSHCPKTLSCERCRKKSFAVLSDLRSHEKQCRGEATWKCSCGNTFSRKDKLFGHVALFEGHLPMLEEEKETSVVAAAAAKGLVKENDGGLDGLPEGFFDGLDEFGFGSSEITSSPEETWPALRLPTNNLNGNSHF* | 333 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac2g03850 | 332 | SMART | c2h2final6 | 120 | 142 | IPR013087 | - | |
Phac2g03850 | 332 | SMART | c2h2final6 | 167 | 200 | IPR013087 | - | |
Phac2g03850 | 332 | FunFam | B-cell CLL/lymphoma 6, member B | 119 | 142 | - | - | |
Phac2g03850 | 332 | Gene3D | Classic Zinc Finger | 159 | 256 | - | - | |
Phac2g03850 | 332 | SUPERFAMILY | beta-beta-alpha zinc fingers | 119 | 144 | IPR036236 | - | |
Phac2g03850 | 332 | PANTHER | PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 | 94 | 271 | IPR044300 | GO:0010044|GO:0010447 | |
Phac2g03850 | 332 | MobiDBLite | consensus disorder prediction | 308 | 332 | - | - | |
Phac2g03850 | 332 | Pfam | Zinc-finger of C2H2 type | 121 | 140 | - | - | |
Phac2g03850 | 332 | Gene3D | Classic Zinc Finger | 120 | 142 | - | - | |
Phac2g03850 | 332 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 122 | 142 | IPR013087 | - | |
Phac2g03850 | 332 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 120 | 147 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac2g03850 | Phac-Chr2 | 38719284 | 38720424 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac2g03850 | 98 | 290 | C2H2 Transcription Factor Family | AT1G34370 | 50.754 | 3.56e-69 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac2g03850 | zf-met | 0.0014 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac2g03850 | - | - | vum:124823301 | 521.161 |