Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03844 ATGGCTGAGGCCAGACACTACGTTCCCCCCTCTCAGTTGGATATCGAGCAAATTATTGTAGAAGCACAGCATCGATGGCTGCGTCCGGCTGAAATTTGTGCAATTCTCAGCAATTACACCAAGTTTCGAATTGCTCCAGAACCTGCTCATATGCCACCAAGTGGTTCACTTTTCTTATTTGATCGGAAGGTGCTGAGATACTTCAGAAAGGATGGCCACAACTGGAGGAAGAAAAAAGATGGAAAAACAGTAAGAGAAGCACATGAGAGACTAAAGGCTGGAAGTGTGGATGTTTTGCACTGCTACTATGCTCATGGAGAAGAAGATGAGAATTTTCAGAGACGTACATATTGGCTGCTTGAAGAGGAACTCTCTAACATTGTTCTAGTTCATTATCGACAAGTGAAGGGAACCAAGTCAAATTATGCATGTGCTAAAGAAACTGAAGAATCTCTTCCTTATGCTCAACAAACTGAAAAAATTATGGTCAAAGCAGAGATGGACACTTCTTTTTCATCCACTCTTCATCCAAACAGTTACCAGGTTCCTTCACAAACTACGGATACAAGCATGAACAGTGCCCAATTATCAGAATATGAAGAAACTGAATCCGCATTCAATAGCCATGCAAGTTCTGAGTTTTATTCTTTCCTTGAGTTACAACGCCCTGTTAAGAAGATTATAAATCAACCTGCTGATTCTTATTCTCCTCAGCCACTCATAAATGAGCAAAAGAAGTTACCTGTCATTGCTGAGGTGAATCATATCTCACTCACTCAAGACAGAAAAATCATAGACATTCATAATGTTGGATTGACGCATGAATCCCCAAAACCCCTGGGCTTCTCCTCGTGGGAAGATATCTTAGGAAATAATGGTGAAAGTCAACACGTGCCTTTTCAGCCTTTATTTCCTGAAATGCAACCTGATAACATGCGAGTCAATAGCAATTTTTGTCAAGGAGATGACATAATTGTGTCACATTTGACCACCAGCATTGCTCAGCTGCATGACAATGGAAGTATCATACAAGCTGAAGGAAGTTGGCAGGGATATAGTGTTGATTCTTTACGCATGTCCACTTGGCCTATAGGCAGTGTCCATTCAAGCTCGACATGCAAGGCTAGTTGTAGCAAATGTGAGCATGAAGTTAATGAAGTTGATTTTCAAAAATCCTTGGAACAGTCTCTTCTCCATCCACACAAACAAAACAAGGTTCTGATGCTAAATGACCCTCAAGAGATACTTCTGAATACAAAAGAAGAGCCAAAATCAGATTTTGAGGCCAATAGAACCCTAGATGGAATAGAAGACACACGTTTCACTTTTAAAAGGACTCTGTTAGATGGATTCCCAGCAGAAGAGAGTCTGAAGAAGCTTGACAGTTTCAACCAGTGGATGAGTAAAGAGCTTGGAGATGTGGAAGAATCAAATAAACCATCTACTTCTGGTGCTTATTGGGATACAGTTGAAAGTGAAAGTGAGGTTGGCAGCACAACTATTCCTTCCCAAGGGCACCTGGACACCTATGTATTGGATCCATCTGTTTCCAATGATCAGCTTTTTAGCATTATTGACTATTCCCCAGGCTGGGCATTTGAAGGGTCAAAAACTAAGATTATCATTTCTGGACGATTCTTAAGAAGTCAACAAGAAGCAGAACTATGTAAATGGTCATGCATGTTTGGTGAGGTCGAAGTGCCTGCAGTGATACTCACAAAAGATGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACTTGTTCCAATAGGTTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCAGGTCAACTGTACTCAAAAAGTCAACACTGCAGGTGATGATAGAGCCAGCACTTTGGATACTTTTAGTAGACGATTTGGAGAACTGTTGTCCCTAGGGCATGCCTTTCCTCAGAATTCATATTCAATCAGTGGAAATGAGAAATCTCAACTGAGGAGTAAAATCAGTTCTTTGCTACGGGGGGAGGATGATGTTTGGGACAAGCTACTGGAACTTACACTACAGAAAGAATTTTCTCCAGAAGATTTACAGGAGCAGCTGCTTCAAAATCTTCTAAAAGATAGGTTGCACGCATGGCTCCTTCAGAAAATTACTGACGATGGGAAAGGCCCCAATGTATTGGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCTGCTGCTCTTGGCTATGATTGGGCCCTAGAACCCACAATAGTTGCTGGTGTGAATGTGAACTTTCGTGATGTGAATGGATGGACTGCTCTTCATTGGGCAGCATTTTATGGCAGGGAGCGCACAGTTGCTTTCCTCGTATCTCTTGGCGCAGCACCTGGATTAGTGACTGATCCATGTCCGGAACATCCTTCTGGTAGACATCCAGCTGACTTAGCTTCTGCAAATGGACATAAAGGAATTGCAGGGTATCTCTCAGAATCTTATCTAAGTGCACAGCTCACAACTCTTGATTTGAACAAGGATGTGGGAGAAAGTCCTGGAGCCAAAGTAGTCCAAAGAATCCAAAACATTGCCCAAGTTAATGATCTTGATGGTTTATCTTATGAACAGTCACTGAAAGATTCATTGGCTGCAGTGTGCAATGCCACCCAAGCTGCTGCTCGTATTCATCAAGTTTTCAGAATGCAATCATTCCAGAGAAAGCAACTGGAGGAATTTGGTGATGACAAATTTGGAATATCCGATGAACGAGCTCTTTCACTTGTAAAAATGAATGGGAAATTACACAAGTCTGGATCACGCGATGAACCGGTCCATGCTGCTGCAATACGTATCCAGAACAAATTCCGTGGCTGGAAGGGCAGAAAAGAATTTTTGATGATTCGACAACGTATTGTAAAAATTCAGGCTCACGTGAGAGGACACCAGGTTAGGAAAAATTGTGGGAAGATAATTTGGTCTGTTGGGATATTGGAGAAGGTTATTTTGCGTTGGCGTCGAAAAGGTAGTGGTTTGCGAGGATTTAAGTCGGAGGCCAATTCTGAGGTAACTATGATACAAGATATAACTTCCCCTGAGGAGGACTACGATTTCTTAAAAGAAGGCAGGAAGCAAACTGAGCAAAGATTGGAGAAAGCCCTAGCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGGGACCAATACCATAGGGTGTTGAATGTAGTAACTGAGATCCAAGAAAATCAGGTAAAGCATGATAGCAGTTGTAACAATTCAGAAGAAACAAGAGACTTCAATAACCTCACTGATCTTGAAGCACTGTTGGAGGAAGATATTTTCATGCCTACAGCAACTTAG 3324 0.4203 MAEARHYVPPSQLDIEQIIVEAQHRWLRPAEICAILSNYTKFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEEDENFQRRTYWLLEEELSNIVLVHYRQVKGTKSNYACAKETEESLPYAQQTEKIMVKAEMDTSFSSTLHPNSYQVPSQTTDTSMNSAQLSEYEETESAFNSHASSEFYSFLELQRPVKKIINQPADSYSPQPLINEQKKLPVIAEVNHISLTQDRKIIDIHNVGLTHESPKPLGFSSWEDILGNNGESQHVPFQPLFPEMQPDNMRVNSNFCQGDDIIVSHLTTSIAQLHDNGSIIQAEGSWQGYSVDSLRMSTWPIGSVHSSSTCKASCSKCEHEVNEVDFQKSLEQSLLHPHKQNKVLMLNDPQEILLNTKEEPKSDFEANRTLDGIEDTRFTFKRTLLDGFPAEESLKKLDSFNQWMSKELGDVEESNKPSTSGAYWDTVESESEVGSTTIPSQGHLDTYVLDPSVSNDQLFSIIDYSPGWAFEGSKTKIIISGRFLRSQQEAELCKWSCMFGEVEVPAVILTKDVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNCTQKVNTAGDDRASTLDTFSRRFGELLSLGHAFPQNSYSISGNEKSQLRSKISSLLRGEDDVWDKLLELTLQKEFSPEDLQEQLLQNLLKDRLHAWLLQKITDDGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFYGRERTVAFLVSLGAAPGLVTDPCPEHPSGRHPADLASANGHKGIAGYLSESYLSAQLTTLDLNKDVGESPGAKVVQRIQNIAQVNDLDGLSYEQSLKDSLAAVCNATQAAARIHQVFRMQSFQRKQLEEFGDDKFGISDERALSLVKMNGKLHKSGSRDEPVHAAAIRIQNKFRGWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWSVGILEKVILRWRRKGSGLRGFKSEANSEVTMIQDITSPEEDYDFLKEGRKQTEQRLEKALARVKSMVQYPEARDQYHRVLNVVTEIQENQVKHDSSCNNSEETRDFNNLTDLEALLEEDIFMPTAT* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03844 1107 Pfam Ankyrin repeats (3 copies) 731 825 IPR002110 GO:0005515
Phac2g03844 1107 ProSiteProfiles IQ motif profile. 955 979 IPR000048 GO:0005515
Phac2g03844 1107 ProSiteProfiles Ankyrin repeat region circular profile. 759 784 - -
Phac2g03844 1107 SUPERFAMILY E set domains 524 609 IPR014756 -
Phac2g03844 1107 Gene3D Immunoglobulins 516 613 IPR013783 -
Phac2g03844 1107 Coils Coil 1023 1043 - -
Phac2g03844 1107 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 13 1070 - -
Phac2g03844 1107 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Phac2g03844 1107 SMART iq_5 931 953 IPR000048 GO:0005515
Phac2g03844 1107 SMART iq_5 954 976 IPR000048 GO:0005515
Phac2g03844 1107 FunFam Calmodulin-binding transcription activator 2 688 835 - -
Phac2g03844 1107 Gene3D - 930 978 - -
Phac2g03844 1107 Pfam IPT/TIG domain 524 598 IPR002909 -
Phac2g03844 1107 SMART ANK_2a 798 827 IPR002110 GO:0005515
Phac2g03844 1107 SMART ANK_2a 759 788 IPR002110 GO:0005515
Phac2g03844 1107 FunFam Calmodulin-binding transcription activator 2 931 979 - -
Phac2g03844 1107 SMART CG_1_2 18 136 IPR005559 GO:0003677
Phac2g03844 1107 ProSiteProfiles IQ motif profile. 933 961 IPR000048 GO:0005515
Phac2g03844 1107 Gene3D - 683 831 IPR036770 -
Phac2g03844 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 928 981 IPR027417 -
Phac2g03844 1107 Pfam IQ calmodulin-binding motif 933 952 IPR000048 GO:0005515
Phac2g03844 1107 Pfam IQ calmodulin-binding motif 957 974 IPR000048 GO:0005515
Phac2g03844 1107 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Phac2g03844 1107 ProSiteProfiles Ankyrin repeat profile. 759 791 IPR002110 GO:0005515
Phac2g03844 1107 SUPERFAMILY Ankyrin repeat 704 820 IPR036770 -
Phac2g03844 1107 FunFam Calmodulin-binding transcription activator 2 517 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03844 Phac-Chr2 38672723 38679915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03844 1 1088 CAMTA Transcription Factor Family AT5G64220 45.389 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac2g03844 Ank_2 9.4e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03844 K21596 - gmx:100798875 1867.82