LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g03811	ATGACGCAGCAGAATGTGGTATTGTCCAAGACAAAATCCGGGATCAACAGGGACCTAACGGTTGCGCAAAAGCCACCGGCTGCGCCGGGAGGCTACATTCCCATTCCGAGGAGGAGGGTTTTGAAGAACCTTGAGATCAATGGAGGACAAAGAATCAATGCATGGGTTGATTCCATGAGAGCCTCTTCTCCCACCCAGGCCAAATCAACCTCTTCCTTCGCTGAAGAACACAGCTCTTGGATTCTTCGCCACCCTTCGGCATTAGACATGTTTGAGCAAATTATGGATGCATCCAGGGGAAAGCAAATCGTCATGTTCCTGGACTATGACGGTACTTTGTCACCTATTGTTGATGATCCAGACCGTGCTTTCATGTCGGATTCGATGAGGAAAACGGTGAGGAAACTTGCGAGGTGTTTTCCCACTGCTATAGTTACAGGCAGATGCAGAGACAAGGTTTACAATTTTGTGCGCTTGGCTGAGCTATATTATGCTGGAAGCCATGGCATGGATATCCAAGGGCCAACAAGAGACTCCAAATACAGCAACAAAGACAAAGGAAAGCCACTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATAGATGAGGTGTACAATCAATTAGTTGAGAAAATGAAATCAATCCCTGGAGCTAGGGTGGAGAACAACAAGTTTTGCGCCTCTGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACAGGAAGTGAGATCAGTGTTAAAAGAGTACCCGAAGCTTCGTCTTAACCAAGGAAGAAAGGTATTAGAGATTCGTCCATCCATTAAATGGGACAAAGGGAAAGCACTGGAATTTTTGTTAGAGTCACTCGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTACATTGGAGATGATAAAACCGATGAAGATGCATTCATGAAACTAAGAGACAGAGGACAAGGTTTTGGGATTCTTGTCTCGAAATTCCCAAAGGACACTACTGCATCCTACTCTTTACAAGAACCTAACGAGGTGATGGATTTCCTTCAACGATTGGTGGAGTGGAAACAAGTATCCCTTCGTCTTCGAGCACGTTCCCGTGTGTAA	1101	0.4514	MTQQNVVLSKTKSGINRDLTVAQKPPAAPGGYIPIPRRRVLKNLEINGGQRINAWVDSMRASSPTQAKSTSSFAEEHSSWILRHPSALDMFEQIMDASRGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIQGPTRDSKYSNKDKGKPLLFQPASEFLPMIDEVYNQLVEKMKSIPGARVENNKFCASVHFRCVDEKKWSELAQEVRSVLKEYPKLRLNQGRKVLEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFMKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQRLVEWKQVSLRLRARSRV*	367

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g03811	366	PANTHER	TREHALOSE 6-PHOSPHATE PHOSPHATASE	33	359	IPR044651	GO:0004805\|GO:0005992
	Phac2g03811	366	FunFam	Trehalose 6-phosphate phosphatase	201	360	-	-
	Phac2g03811	366	CDD	HAD_TPP	104	344	-	-
	Phac2g03811	366	FunFam	Trehalose 6-phosphate phosphatase	195	271	-	-
	Phac2g03811	366	Pfam	Trehalose-phosphatase	106	340	IPR003337	GO:0003824\|GO:0005992
	Phac2g03811	366	Gene3D	-	203	362	IPR023214	-
	Phac2g03811	366	Gene3D	-	103	190	IPR023214	-
	Phac2g03811	366	FunFam	Trehalose 6-phosphate phosphatase	103	189	-	-
	Phac2g03811	366	NCBIfam	HAD-IIB family hydrolase	105	312	IPR006379	-
	Phac2g03811	366	NCBIfam	trehalose-phosphatase	101	351	IPR003337	GO:0003824\|GO:0005992

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g03811	Phac-Chr2	38513007	38515977	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g03811	94	357	Trehalose Biosynthesis Gene Families	AT1G06410	24.382	3.00e-07	50.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g03811	K01087		-	gmx:100788735	650.588

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