Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03810 ATGGGAACCGCTATAGATATGTACAACAACACCAACATCGTACCGGATTTCCTAGATCCGTATAGTGAGGAGCTGATGAGAGCACTTGAGCCTTTTATGAAAACTGATTATTTCTCTGCCTCTTCTAATTCCGCATCTCCTTCACACCCTTCTTCTCTCATTTCATCTACTTCGTATCCCTCCCCCAAGCAAGTCAAACTAAACCAACTCACCTCAGATCAAATCCTCCAGATTCAGGCCCAGGTCGGGATTCAACAGCACGTGGGTCATTCGAACCATCGTCAAAATCAAGCCCAGCTGGGGCCAAAACGTGTCCCCATGAAACACGGTGGCGCGGCCGCGAAAGCTGCGAAGCTGTACCGTGGGGTGCGGCAACGGCATTGGGGGAAGTGGGTCGCCGAGATCAGACTCCAGAAGAACCGCACGCGCCTCTGGCTGGGAACATTCGACACCGGAGAGGAAGCGGCGTTGGCGTACGACAACGCAGCGTTTAAGCTCCGAGGCGAGTTCGCGCGCCTCAACTTCCCTCATCTGCGACACCAGGGAGCGTTCGTATTCGGCGACTTTGGAGATTACAAGCCGCTACCTTCTTCCGTGGACTCCAAGCTCCAAGCTATTTGTGAAAGCATGGGAAAACAAGAACAAAAAAAGTGTTGCTCTGTCGAAGACGTGAAGCCCGAGGTACACGCTGCTGCTGAGCTGGCGCCGGTGGAGTCTGATGTGGCGCAATCCAACGTTTGTCCCGAGTTCGACAATATTAAGGTAGAAAACGTGAACGAAAATCCAATGTTGTCATGGCCTGTGTCTGGCGAATCTTCTTCGCCTGAATCGGGTTTTACTTTCTTGGATTTCTCGGATTTCTCATATTCTAATTATCAGTGGGATGAAATAGAGAGTTTTGGGTTGGAGAAGTACCCTTCGGTGGAGATTGATTGGGCGGCTATATGA 948 0.5095 MGTAIDMYNNTNIVPDFLDPYSEELMRALEPFMKTDYFSASSNSASPSHPSSLISSTSYPSPKQVKLNQLTSDQILQIQAQVGIQQHVGHSNHRQNQAQLGPKRVPMKHGGAAAKAAKLYRGVRQRHWGKWVAEIRLQKNRTRLWLGTFDTGEEAALAYDNAAFKLRGEFARLNFPHLRHQGAFVFGDFGDYKPLPSSVDSKLQAICESMGKQEQKKCCSVEDVKPEVHAAAELAPVESDVAQSNVCPEFDNIKVENVNENPMLSWPVSGESSSPESGFTFLDFSDFSYSNYQWDEIESFGLEKYPSVEIDWAAI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03810 315 Pfam AP2 domain 120 169 IPR001471 GO:0003700|GO:0006355
Phac2g03810 315 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 315 - -
Phac2g03810 315 MobiDBLite consensus disorder prediction 39 60 - -
Phac2g03810 315 CDD AP2 120 178 IPR001471 GO:0003700|GO:0006355
Phac2g03810 315 FunFam Ethylene-responsive transcription factor 2 118 177 - -
Phac2g03810 315 Gene3D AP2/ERF domain 119 177 IPR036955 GO:0003700|GO:0006355
Phac2g03810 315 SUPERFAMILY DNA-binding domain 119 177 IPR016177 GO:0003677
Phac2g03810 315 ProSiteProfiles AP2/ERF domain profile. 119 176 IPR001471 GO:0003700|GO:0006355
Phac2g03810 315 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Phac2g03810 315 PRINTS Ethylene responsive element binding protein signature 142 158 IPR001471 GO:0003700|GO:0006355
Phac2g03810 315 SMART rav1_2 119 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03810 Phac-Chr2 38468108 38469947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03810 4 315 AP2-EREBP Transcription Factor Family AT4G39780 48.089 1.25e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g03810 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03810 K09286 - gmx:100797648 465.692