LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g03777	ATGGAAAACATGCATTGGTCACATAAACATTCACTGGTGCTGTGTTTCTTGGCAATGCTTCTAATACCTTCCTTGTGTCAAAGTGAAGTAACAACAGCTGTGTACATTGTTACTCTCAGACAAGCTCCTGCTTCTCTCTACCATCATGAGTTGAACACTGTGGGTAACAAGTCTGGACATGGTGCATCTGGGAGAAGAAGAACTAGAGTTCATAAACCAAGACATCAGAATGTTACAAAGACAGATAAGGGATATGGTTCATACTTTGCCCGAGTTCATGACTTGTTGTTGAATAAGGTGTTTAAGGGGGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTGGTTACCCAACAGCAGGCAGACAAACTGGCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCAGTGAGGACTGCAACCACACACACTCCACAATTTTTGGGGCTGCCACAGGGAGCTTGGTTTCAAGCAGGTGGGTTTGAAACTGCTGGAGAAGGAATTACTATTGGGTTTGTTGACACTGGCATTGATCCTACACACCCCAGTTTTGCTGATGATAAATCTCAACATCCTTTCCCTATTCCTGCTAATTTCTCTGGCGTCTGTGAGGTTACTCCAGATTTTCCATCCGGTTCTTGCAATAGGAAGCTTGTTGGGGCCAGACATTTTGCAGCTTCTGCTATAACCAGAGGAATATTTAACTCATCTCAGGACTATGCTTCTCCCTTTGATGGAGATGGCCATGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCAGTGGTCGTTGGTGGACAATTTTTTGGAAATGCTAGTGGGATGGCTCCTCATTCGCACATTTCCATTTACAAGGCATTATACAAGAGATTTGGAGGATTTGCAGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATATGCTTGTCAATCACTCCTAATAGGAGGCCTTCTGGTATTGCAACTTTCTTCAACCCAATTGATATGGCATTGCTGTCAGCTGTAAAAGCAGGTATTTTTGTAGTGCAAGCTGCTGGCAACACTGGACCATCACCTATGAGCATGTCCTCCTTCAGTCCTTGGATCTTTACAGTTGGTGCCACCTCTCATGATCGAGTTTATAGCAACTCCTTATCTCTTGGAAATAATGTGACAATACCTGGAGTTGGACTTGCACCCGGCACACATGAGAACACAATGTTCAAACTGATTCATGCACGACATGCTTTGAACAAAACCATAACAGTTGCTGATGATATGTATATTGGTGAGTGTCAAGATGCAAGTATATTCAACCAGGATTTGGTCAAGGGCAACCTTTTGATCTGTAGCTATTCAGTCCGATTTGTACTTGGGCTCTCTACCATCAAACAGGCCTTAGAAACAGCCATGAACCTTAGTGCGGTTGGGGTTGTTTTCTCTATGGATCCTTTTGTGACTTCTTTTCAGCTTAACCCAGTTCCAATGAAAATGCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGGAATACTACAATTCTTCACTGGAAATAGATGGGGACTCAAATAAAATTGTTAAATTTGGAGCTGTTGCTAGTATTGGTGGGGGATTAGAAGCTAACTACAATAATGAGGCCCCAAAGGTTGTGTATTACTCTGCCAGAGGACCCGATCCAGAAGACAGTCTTCCTCATGAAGCTGACATTATGAAACCCAATTTGGTAGCACCTGGAAATTCTATATGGGCTGCTTGGAGTTCTCTTGCCTCTGATTCTGTTGAATTTCAAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCGCTAGTTAAGCAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCCTCACTTTCCACCTCAGCTTCTCTGTATGACAATAATGGGAGGTCAATATTGGCTCAGAGATCATATCCTACTGTAGACCTTAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCTGGTTTACTCTTTGATTCTAGTAAGTCACACTTAACTAATGAACTTTTAAATAATTATAATGTCTATGCAGATTCAAATGCTTCAAAAATTCAGCTGCAGTTGTTGTTCAATATCTCACTTAGCTAG	2223	0.4242	MENMHWSHKHSLVLCFLAMLLIPSLCQSEVTTAVYIVTLRQAPASLYHHELNTVGNKSGHGASGRRRTRVHKPRHQNVTKTDKGYGSYFARVHDLLLNKVFKGEKYLKLYSYHYLINGFAVLVTQQQADKLARRREVSNVVLDFSVRTATTHTPQFLGLPQGAWFQAGGFETAGEGITIGFVDTGIDPTHPSFADDKSQHPFPIPANFSGVCEVTPDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVVVGGQFFGNASGMAPHSHISIYKALYKRFGGFAADVVAAIDQAAQDGVDIICLSITPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLSLGNNVTIPGVGLAPGTHENTMFKLIHARHALNKTITVADDMYIGECQDASIFNQDLVKGNLLICSYSVRFVLGLSTIKQALETAMNLSAVGVVFSMDPFVTSFQLNPVPMKMPGIIIPSANDSKILLEYYNSSLEIDGDSNKIVKFGAVASIGGGLEANYNNEAPKVVYYSARGPDPEDSLPHEADIMKPNLVAPGNSIWAAWSSLASDSVEFQGENFALMSGTSMAAPHVAGLAALVKQKFPNFSPAAIGSSLSTSASLYDNNGRSILAQRSYPTVDLNLSPATPFDMGSGFVNATAALNPGLLFDSSKSHLTNELLNNYNVYADSNASKIQLQLLFNISLS*	741

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g03777	740	Pfam	Peptidase inhibitor I9	34	149	IPR010259	-
	Phac2g03777	740	Gene3D	-	389	557	-	-
	Phac2g03777	740	SUPERFAMILY	Subtilisin-like	149	701	IPR036852	GO:0004252\|GO:0006508
	Phac2g03777	740	ProSiteProfiles	Serine proteases, subtilase domain profile.	154	697	-	-
	Phac2g03777	740	ProSitePatterns	Serine proteases, subtilase family, serine active site.	620	630	IPR023828	-
	Phac2g03777	740	Gene3D	Peptidase S8/S53 domain	176	707	IPR036852	GO:0004252\|GO:0006508
	Phac2g03777	740	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	104	717	IPR045051	-
	Phac2g03777	740	CDD	Peptidases_S8_3	149	656	IPR034197	-
	Phac2g03777	740	CDD	PA_subtilisin_like	395	530	-	-
	Phac2g03777	740	Pfam	Subtilase family	174	655	IPR000209	GO:0006508\|GO:0008236
	Phac2g03777	740	MobiDBLite	consensus disorder prediction	52	74	-	-
	Phac2g03777	740	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	179	190	IPR023827	-
	Phac2g03777	740	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	24	147	IPR037045	-
	Phac2g03777	740	PRINTS	Subtilisin serine protease family (S8) signature	174	193	IPR015500	-
	Phac2g03777	740	PRINTS	Subtilisin serine protease family (S8) signature	619	635	IPR015500	-
	Phac2g03777	740	PRINTS	Subtilisin serine protease family (S8) signature	254	267	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g03777	Phac-Chr2	38227267	38237044	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g03777	31	706	Subtilisin-like Serine Gene Family	AT4G20430	70.674	0.0	994

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g03777	-		-	gmx:100814065	1267.29