LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac2g03770	ATGGATATTTTCATGCAATCTTTGTTACTTACTGTGATCACCTTCACTGCATCTGTCTATGTTTTGCAGAAAAGAAGAAGATCAGTTGCCACTAAAGCCTTGCCCCCTGGTACCTTAGGGTGGCCCCTGGTGGGTGAAACCTACCAATTTTTGTTCATCAAGACTCAACATTTCATTCAAGAGAGGGTCAAAAAGTACTCCTCAGAGATCTTCCACACAAATATTCTAGGAGAGCCAACAGTGGTTCTTTATGGCCCTGCAGCAAACAAATTTCTCTCCACCAATGAGACAAAACTTGTCAAAGTTTGGTACATGAAGACTCAGCGCAGCTTCTTCAACATTCCTGATCAAACACATGCAGCAAAGCCAAAACCAAGACAAGAAGCTGCATCTGCTGCTCCAGTGACGATCTTGGGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGGAACAGGATTGGATCAACCATACATCAACATTTCATGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTGAAGGCCTTTACCCTCACACTGGTTTGTCAATTCTTCTTAGGCATTGATGAACCAAAATTGGCCAGTGAGTTTGAGAACTTGTTTTTTGGGATCTACTCTGTTCCTGTGAATTTTCCTGGCTCTGCATACCGTAGGGCGCTGAAGGCTTCAGCTGCAATAAGGAAAGAGATCCAATTTCTGATCAAAGAGAAGATTGATGCTTTGTCCAAGGGGCAAGTTGTGGATGACCTACTAGCACACGTAGTTGGCGCTGAGCAGGGTGGAAAATATGTGCCAAGATTTGAAATAAGCAACATCATCATGGGGTTGATGAATTCCAGCCACATGCCAATAGCTGTTACTCTGGCTTTCATGATCAAACACATTGGACAGAGGCCTGATATCTTCCAAAAAATCGTATCAGAGCATGCTGATGTAACAAAATCCAAAGGATCTGGTGCAGCACTAGGCTGGGACAGCATTCAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACTATGAGACTTTATCCAACTGCACCAGGTGTTTTCAGAGAGGTCTTAACAGATATCACCTATGAAGGTTTTACTATTCCAAAGGGGTGGAAGATCTTTTGGTCCCTTGTTGGGACAAATAAGGATCCCAACTACTTTCCTGAACCTGAAAGTTTTGATCCCTCAAGGTTTGAAGGGAATGTTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGAAAAGACTACATGCGGTTTGTGGTCCTCAATTTCATTCACATTCTTATAAACAAGTTCAAGTGGGAAGTTATACTTCCTGATGAGAAAGTTTCAGGTGTTCTAATACCTACCCCAGCAGAGGGAGTTTCTATCCGTCTATTTCACCACTAA	1422	0.4346	MDIFMQSLLLTVITFTASVYVLQKRRRSVATKALPPGTLGWPLVGETYQFLFIKTQHFIQERVKKYSSEIFHTNILGEPTVVLYGPAANKFLSTNETKLVKVWYMKTQRSFFNIPDQTHAAKPKPRQEAASAAPVTILGILKPEGIARYMGNRIGSTIHQHFMTHWEGKTEVKVYPLVKAFTLTLVCQFFLGIDEPKLASEFENLFFGIYSVPVNFPGSAYRRALKASAAIRKEIQFLIKEKIDALSKGQVVDDLLAHVVGAEQGGKYVPRFEISNIIMGLMNSSHMPIAVTLAFMIKHIGQRPDIFQKIVSEHADVTKSKGSGAALGWDSIQKLKYTWAVAQETMRLYPTAPGVFREVLTDITYEGFTIPKGWKIFWSLVGTNKDPNYFPEPESFDPSRFEGNVLPAPYTWIPFGAGPRSCPGKDYMRFVVLNFIHILINKFKWEVILPDEKVSGVLIPTPAEGVSIRLFHH*	474

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac2g03770	473	CDD	CYP90-like	62	472	-	-
	Phac2g03770	473	PRINTS	E-class P450 group I signature	64	83	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	PRINTS	E-class P450 group I signature	339	357	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	PRINTS	E-class P450 group I signature	379	403	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	PRINTS	E-class P450 group I signature	412	422	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	PRINTS	E-class P450 group I signature	422	445	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	PRINTS	E-class P450 group I signature	293	319	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	Gene3D	Cytochrome P450	23	472	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac2g03770	473	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	415	424	IPR017972	GO:0005506\|GO:0016705
	Phac2g03770	473	PANTHER	CYTOCHROME P450 26	32	450	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac2g03770	Phac-Chr2	38179286	38181587	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac2g03770	34	376	Cytochrome P450	AT5G36110	32.869	4.32e-68	221

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac2g03770	K20667		-	var:108321875	823.928

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