Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03727 ATGAATATTGAACCTGAAAATTGTCCTGAAGCGGTGAAACAATGGTACTACCTCACATCACTACCAAAGAACAAGAGAAAGTGGACAATGCACAGGGACCTCTCCTTACAAGCCAAGAAACATCTTCTTTATCTAGGGTGGAAATTTTGGTACGTTGACAAGAAAGAAAAATGGGAGTTGCGTTACACATCACCCGTCAGTGGCAAGAATTACATTTCACTCACAAGAGCATGTAAAGGCTGCATTGAAGAAGACGGTGGTTATGGAAACCTTCAAAATCCTAAAGAAAACAACGTTCTTGAATATCCTACGTCTTCCCAACCAAAAAAGGAAACAACAGAATCCAGAAAGTTGTGCAAGAAAAGGCAAAGGGATGATAAAGATGATGAGTTAGGGGAAGGTTTTATTTCTATGACTGGTAGAAGAGGTAAGTCTGTGCGGTCAATCAAAAGAATGAGGCAAAACGGATTCATTTTAGAAGATGAAAGGTCATTGTTAGATCCTCAAAAAGAGGTCCTGAGTTCTCAGCAAAACGGGTTTGTGGAAGAAGAGCAAGTGGATGACTGTGGTTATCGAAATGATAGCATTTGTGCCGCTTGTTGTTACGGTGGTGAACTAGTGTTGTGTGATGGATGCCCCTCTTCGTTCCATCTTAGGTGTTTAGGTTTAATCCATGTCCCTGATGGTGAATGGTTCTGTCCTGTTTGTTCTTGTAAAATATGCAGGCGACCGAGATGCAGAGATGACTCTGCTCATAATGTGGGTGTTAACAGTGTTTTAGTCTGTCATCAGTGTGAGGGAAAATACCATATTGGGTGCTTAAAAGATCCAGCACCAGCACACATGGAAAAGAAAGAAGACGATGTTGGTAAAGGGAATTGGTTCTGCTGTAGAGACTGTGAGGAGATATTTTTCAGTCTGCATGAGCTTTTGGGAAAAACTATTAATGTTGCTCCATATAATCTTACTTGGACGCTGTTGAATGCGGTGAAAAGGGATGGAAGTGGAGAAAACGAAAGCAAGTTGAGTGCAGCACTTGATGTATTGCATGAGAGTTTCGACCCAGTGATTGATGTTTTTTCTGGTAGAGATGTGATAGCTGACGTTGTTTTCAGCAGAGGATCAGAAGACAATCGCTTGAATTATCGTGGCTTTTATACTGTGGTTCTCGAGAGGGATAAGGAGGTGGTTTGTGTTGCTACTGTAAGGATTTTTGGGAAGAGGGTTGCGGAAATTCCCTTTGTGGCTACTAAGATGCAGTGTAGAAGACAAGGAATGTGTGGCATCTTGATGAATGAGATTGAGAAATTGTTAACCTACTTGGGAGTGGAGAGGTTGATTCTGCCTTCCTCGTACACTGCCGTAGACACTTGGACAAAATCATTCGATTTTGTCAAGATGAAACCTTCAGAAAAGTCTCAGCTACTTGATTATGTTTTTCTGAACTTCGAGGGTACCCTCGTGTGCCACAAACCTTTGTTGCAACAAACTTATGTATGA 1500 0.4153 MNIEPENCPEAVKQWYYLTSLPKNKRKWTMHRDLSLQAKKHLLYLGWKFWYVDKKEKWELRYTSPVSGKNYISLTRACKGCIEEDGGYGNLQNPKENNVLEYPTSSQPKKETTESRKLCKKRQRDDKDDELGEGFISMTGRRGKSVRSIKRMRQNGFILEDERSLLDPQKEVLSSQQNGFVEEEQVDDCGYRNDSICAACCYGGELVLCDGCPSSFHLRCLGLIHVPDGEWFCPVCSCKICRRPRCRDDSAHNVGVNSVLVCHQCEGKYHIGCLKDPAPAHMEKKEDDVGKGNWFCCRDCEEIFFSLHELLGKTINVAPYNLTWTLLNAVKRDGSGENESKLSAALDVLHESFDPVIDVFSGRDVIADVVFSRGSEDNRLNYRGFYTVVLERDKEVVCVATVRIFGKRVAEIPFVATKMQCRRQGMCGILMNEIEKLLTYLGVERLILPSSYTAVDTWTKSFDFVKMKPSEKSQLLDYVFLNFEGTLVCHKPLLQQTYV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03727 499 Gene3D - 326 491 - -
Phac2g03727 499 SMART PHD_3 238 301 IPR001965 -
Phac2g03727 499 SMART PHD_3 196 237 IPR001965 -
Phac2g03727 499 MobiDBLite consensus disorder prediction 92 125 - -
Phac2g03727 499 CDD NAT_SF 388 448 - -
Phac2g03727 499 ProSiteProfiles Zinc finger PHD-type profile. 194 239 IPR019787 -
Phac2g03727 499 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 376 460 IPR016181 -
Phac2g03727 499 SUPERFAMILY FYVE/PHD zinc finger 183 247 IPR011011 -
Phac2g03727 499 PANTHER PHD FINGER PROTEIN 12 9 496 IPR042163 GO:0003714|GO:0045892
Phac2g03727 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 240 IPR013083 -
Phac2g03727 499 Pfam PHD-finger 196 239 IPR019787 -
Phac2g03727 499 MobiDBLite consensus disorder prediction 92 109 - -
Phac2g03727 499 MobiDBLite consensus disorder prediction 110 125 - -
Phac2g03727 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 241 303 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03727 Phac-Chr2 37939367 37942830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03727 157 441 PHD Transcription Factor Family AT5G58610 44.816 7.44e-72 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03727 - - pvu:PHAVU_002G248300g 756.133