Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03712 ATGGGTAATTGCTGGTGTAGATGGGAGTCATCAGATTATAGAGTTTCATCCAATGTAAAGTCAGAACAAAACCAGGTAACCAAGCAAAGGAATGATTATGATAGCAAGTTACCATCAAACCCTGAGGAAGTAGAAGACCTACGCCGTGACTCAGCTGCAAATCCATTGATTGTATTCACTTATGATGAGTTGAAGACAATCACTGCAAATTTTAGGCCAGATCGTGTGTTGGGGGGAGGAGGATTTGGAAGTGTGTACAAAGGGTTCATTTCTGAGGAGTTAAGGCAGGGTCTTCCTACCCTTGCTGTTGCTGTGAAGGTTCATGATGGTGACAATAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCAAATCTAGTCAAATTAGTTGGATACTGCTGCGAGGATGAACATAGGGTGCTAATATATGAGTACATGTCCCGGGGAAGTGTGGAGCACAACTTGTTCTCAAAAATCTTGCTTCCCCTGCCATGGTCCATAAGAATGAAGATTGCATTTGGTGCTGCTAAGGGACTTGCATTTCTTCATGAAGCAGAGAAACCTGTCATCTATCGTGATTTCAAGACATCAAATATTTTATTGGATCAGGACTACAATGCAAAACTTTCTGATTTTGGCCTTGCTAAGGATGGACCAGTTGGAGACAAATCACATGTTTCTACTCGAGTAATGGGAACATATGGTTATGCAGCACCTGAGTACATAATGACAGGTCATCTGACTCCTAGAAGTGATGTTTACAGTTTTGGGGTTGTTCTTCTTGAACTTCTCACGGGAAGAAAATCTTTAGACAAGTTAAGACCTGCTAGAGAGCAGAACCTCACAGAATGGGCTATTCCTTTGCTCAAGGAAAAGAAGAAATTTCTAAACATAATAGATCCAAGGTTGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTTCATATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTCTGATGCGAGACATTGTGGACTCATTGGAGCCTTTGCAGGCACACACAGAGGTCCCTAAAACACTGACCATAATCAGTGATGTTCCTGAATCTGGTCTGAAAATGAAAGATGCAAAATGA 1140 0.4202 MGNCWCRWESSDYRVSSNVKSEQNQVTKQRNDYDSKLPSNPEEVEDLRRDSAANPLIVFTYDELKTITANFRPDRVLGGGGFGSVYKGFISEELRQGLPTLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLVGYCCEDEHRVLIYEYMSRGSVEHNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQDYNAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYIMTGHLTPRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLTEWAIPLLKEKKKFLNIIDPRLDGDYPIKAVHKAAMLSYHCLNRNPKARPLMRDIVDSLEPLQAHTEVPKTLTIISDVPESGLKMKDAK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03712 379 CDD STKc_IRAK 77 352 - -
Phac2g03712 379 PANTHER OS01G0588500 PROTEIN-RELATED 29 353 - -
Phac2g03712 379 FunFam Serine/threonine-protein kinase BIK1 38 154 - -
Phac2g03712 379 Gene3D Transferase(Phosphotransferase) domain 1 155 366 - -
Phac2g03712 379 SUPERFAMILY Protein kinase-like (PK-like) 43 349 IPR011009 -
Phac2g03712 379 MobiDBLite consensus disorder prediction 17 34 - -
Phac2g03712 379 ProSitePatterns Protein kinases ATP-binding region signature. 77 106 IPR017441 GO:0005524
Phac2g03712 379 Gene3D Phosphorylase Kinase; domain 1 33 154 - -
Phac2g03712 379 ProSiteProfiles Protein kinase domain profile. 71 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03712 379 FunFam Probable serine/threonine-protein kinase PBL8 155 367 - -
Phac2g03712 379 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Phac2g03712 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Phac2g03712 379 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03712 Phac-Chr2 37792898 37799207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03712 14 349 Glycoside Hydrolase AT3G07070 48.266 3.45e-105 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac2g03712 PK_Tyr_Ser-Thr 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03712 - - gmx:100775722 726.857