Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03705 ATGAATAACTACTGTTATAATGAAGATGATGGGCAGCACCAGTCAGAATCCCAAGTGCAGTCCCCATCTGCTAATGGAATTTCTGATTCTGGTATTAGTACCCAGAATGTCAATATACAGTATGCAACACCGGGCCAGCTTGGAGCTGGGCATGCAATGGTACCACCTGTGTATCCATATCCAGATCCTTATTACAGAAGCATCTTTGCTCCCTATGATACTCAAGCTTATCCCCCACAAGCCTATAGTGGACAGCCAATGGTTCATCTTCAGTTAATGGGGATTCAGCAAGCTGGCGTCCCTCTGCCAACTGATGCAGTAGAGGAGCCTGTGTTTGTCAATGCAAAACAATATCACGGTATATTGAGACGTAGACAATCCCGTGCTAAAGCTGAATCAGAAAATAAAGCTATAAGAAATAGGAAGCCATACTTGCATGAATCTCGACACATGCACGCACTGAGAAGACCGAGAGGATGTGGTGGTCGGTTTCTGAATTCAAAGAAAGAAGAGAATGAGCATAATGATGTGGCATCAGCTGAGAAATCACAATCCAATATCAATCTCAATTCTGATAAAAATGATCAAACGTCATCAGATAGGACATCCTGA 612 0.4297 MNNYCYNEDDGQHQSESQVQSPSANGISDSGISTQNVNIQYATPGQLGAGHAMVPPVYPYPDPYYRSIFAPYDTQAYPPQAYSGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHMHALRRPRGCGGRFLNSKKEENEHNDVASAEKSQSNINLNSDKNDQTSSDRTS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03705 203 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 14 201 IPR001289 GO:0003700|GO:0006355
Phac2g03705 203 MobiDBLite consensus disorder prediction 179 197 - -
Phac2g03705 203 MobiDBLite consensus disorder prediction 1 32 - -
Phac2g03705 203 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 109 164 IPR001289 GO:0003700|GO:0006355
Phac2g03705 203 ProSitePatterns NF-YA/HAP2 subunit signature. 112 132 IPR018362 GO:0003677|GO:0016602
Phac2g03705 203 PRINTS CCAAT-binding transcription factor subunit B signature 110 132 IPR001289 GO:0003700|GO:0006355
Phac2g03705 203 PRINTS CCAAT-binding transcription factor subunit B signature 141 164 IPR001289 GO:0003700|GO:0006355
Phac2g03705 203 ProSiteProfiles NF-YA/HAP2 family profile. 107 167 IPR001289 GO:0003700|GO:0006355
Phac2g03705 203 Gene3D - 107 168 - -
Phac2g03705 203 SMART cbf3 106 167 IPR001289 GO:0003700|GO:0006355
Phac2g03705 203 MobiDBLite consensus disorder prediction 126 144 - -
Phac2g03705 203 MobiDBLite consensus disorder prediction 126 203 - -
Phac2g03705 203 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03705 Phac-Chr2 37720868 37725150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03705 10 203 CCAAT-HAP2 Transcription Factor Family AT1G30500 58.763 6.43e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Phac2g03705 CBFB_NFYA 3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03705 K08064 - gmx:100499754 374.4