Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03701 ATGGTACCACCTGTGTATCCATATCCAGATCCTTATTACAGAAGCATCTTTGCTCCCTATGATACTCAAGCTTATCCCCCACAAGCCTATAGTGGACAGCCAATGGTTCATCTTCAGTTAATGGGGATTCAGCAAGCTGGCGTCCCTCTGCCAACTGATGCAGTAGAGGAGCCTGTGTTTGTCAATGCAAAACAATATCACGGTATATTGAGACGTAGACAATCCCGTGCTAAAGCTGAATCAGAAAATAAAGCTATAAGAAATAGGAAGCCATACTTGCATGAATCTCGACACATGCACGCACTGAGAAGACCGAGAGGATGTGGTGGTCGGTTTCTGAATTCAAAGAAAGAAGAGAATGAGCATAATGATGTGGCATCAGCTGAGAAATCACAATCCAATATCAATCTCAATTCTGATAAAAATGATCAAACGTCATCAGATAGGACATCCTGA 456 0.4232 MVPPVYPYPDPYYRSIFAPYDTQAYPPQAYSGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHMHALRRPRGCGGRFLNSKKEENEHNDVASAEKSQSNINLNSDKNDQTSSDRTS* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03701 151 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 6 149 IPR001289 GO:0003700|GO:0006355
Phac2g03701 151 MobiDBLite consensus disorder prediction 111 126 - -
Phac2g03701 151 SMART cbf3 54 115 IPR001289 GO:0003700|GO:0006355
Phac2g03701 151 PRINTS CCAAT-binding transcription factor subunit B signature 58 80 IPR001289 GO:0003700|GO:0006355
Phac2g03701 151 PRINTS CCAAT-binding transcription factor subunit B signature 89 112 IPR001289 GO:0003700|GO:0006355
Phac2g03701 151 MobiDBLite consensus disorder prediction 127 145 - -
Phac2g03701 151 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 57 112 IPR001289 GO:0003700|GO:0006355
Phac2g03701 151 ProSiteProfiles NF-YA/HAP2 family profile. 55 115 IPR001289 GO:0003700|GO:0006355
Phac2g03701 151 MobiDBLite consensus disorder prediction 73 92 - -
Phac2g03701 151 MobiDBLite consensus disorder prediction 72 151 - -
Phac2g03701 151 ProSitePatterns NF-YA/HAP2 subunit signature. 60 80 IPR018362 GO:0003677|GO:0016602
Phac2g03701 151 Gene3D - 55 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03701 Phac-Chr2 37719541 37725150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03701 1 151 CCAAT-HAP2 Transcription Factor Family AT1G30500 68.212 8.85e-70 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Phac2g03701 CBFB_NFYA 1.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03701 K08064 - gmx:100499754 292.737