Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03643 ATGGCTGATTATTCAGGAGGATCTGAAACACACGAGGTGGTTGTAAATGTAACCAAGGACACCCCCAAAACAATGGAACGCTCCGACTCCTTTGTCTCTGTTCCTTTCTTGCAGAAGTTGATAGCTGAGGTGGTGGGCACGTATTTCTTGATATTCGCCGGATGTGGTTCAGTTGTGGTGAACAAGAATAACTACAACGTGGTAACACTTCCTGGGATAGCAATTGTTTGGGGGCTGGTTGTCGCAGTGCTGGTTTACTCTGTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAAAAGGTTTCCCTTGTCGCAGGTACCAGCTTATGTGGCAGCTCAGCTGCTAGGAAGCACACTTGCAAGTGGAACTCTGAAGCTATTGTTTATGGGGAAGCATGACCAGTTTTCAGGAACAGTTCCAAGTGGAACTGACCTGCAAGCTTTTTTCTTTGAATTCATAATCACATTTCTCCTTATGTTTGTCATATCAGGGGTTGCCACTGATAACAGAGCGATCGGTGAGTTGGCAGGGATTGCCGTTGGGGCCACCGTGCTGTTGAATGTGATGTTGGCAGGACCAATCACAGGAGCATCAATGAACCCAGCAAGAAGTTTAGGCCCTGCCTTGGTGCACAATGAATTCAGAGGAATATGGATATATTTAGTGTCTCCAACGTTTGGGGCTGTGGTTGGTGCATGGGTGTATAACAGTATTCGTTACACAGATAAGCCACTGCGTGAGATCACCCAAAGTGCATCTTTCCTTAAAGGAAAAAGGCTTAGTGATGCCTCTACCTGA 825 0.4679 MADYSGGSETHEVVVNVTKDTPKTMERSDSFVSVPFLQKLIAEVVGTYFLIFAGCGSVVVNKNNYNVVTLPGIAIVWGLVVAVLVYSVGHISGAHFNPAVTIAFASTKRFPLSQVPAYVAAQLLGSTLASGTLKLLFMGKHDQFSGTVPSGTDLQAFFFEFIITFLLMFVISGVATDNRAIGELAGIAVGATVLLNVMLAGPITGASMNPARSLGPALVHNEFRGIWIYLVSPTFGAVVGAWVYNSIRYTDKPLREITQSASFLKGKRLSDAST* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03643 274 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Phac2g03643 274 NCBIfam MIP family channel protein 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 CDD MIP 38 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 Gene3D Glycerol uptake facilitator protein. 5 260 IPR023271 -
Phac2g03643 274 SUPERFAMILY Aquaporin-like 32 258 IPR023271 -
Phac2g03643 274 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac2g03643 274 PANTHER AQUAPORIN NIP2-1 26 264 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03643 Phac-Chr2 37330316 37340813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03643 34 265 Major Intrinsic Protein MIP AT5G37810 61.638 2.90e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03643 K09874 - gmx:100813448 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03643 2 37330316 37340813 Phac2g03643 2 37330316 37340813 ECH