Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03609 ATGGATCTGGCAAAAAGCAAAGGCAGTGGTGAAGTTTTGGATCATGTTGATGAAAGGGTGGGTGAGGATTTTAACCAATTGGTTGAAGGAAATGCAATTGATGCAGGAGGTGGACATAGCTTGGGTGAAAGAGTTAGTGTAAGTGGGAAAGATGGGACTCCTGAAGAAACGTGTAATGGTCTTGGTTTGAATGGGGAGCTAAAAGAGGGGCTACAAGAAGTTAGTGATCAGAACATGGGTGACCCTCAAGAAATTAATGATACATTACACGGGGTTGATCAAGGAACCAGTTATAGTTCAAGAAATTTGATTAGTGGGGAAGTGCCTGAGACTTTTGTTATAATAGATCCTTCCGCTCAGATTGATTGTGTCAGTGGAGAAAATACAAAATTGGAAGCTAAACCTAATGATTCAGGGTTGAGCAAGGTGTCCATGAAAGTAATAAAAGGGGTGTCTGAGATAGATAAAAATTCATGTGTGATTGATGTAAACCGTGGCAGCTGCGACGGTTTTAGTGAGAATTTGGAAGGTGAAATGATTTGTAGGATTTGCCATCTGGCCTCTGGGCAACCATTAGAAGCAGCATCTATCGGCACTGTAAGTAGTGCTACTACTAATACAGATTTGATTCAGCTTGGTTGTGCATGTAAAGATGAGTTAGGTATTGCTCACAATCATTGTGCTGAGGCATGGTTCAAGATTAAAGGAAACAGGTTGTGTGAAATATGTGGTGAGACTGCAAAGAATGTTTCGGACGTTGCTGATCATGGACTTATGGAAGAATGGAATGATACTAGATTCATTGGCAATGATAATACCTCATCCAGAAGGTTTGGTGGATGCTGGCGCGGACAACCATTTTGTAACTTCTTAATGGCATGCCTGGTTATAGCTTTTGTTCTACCATGGTTCTTTCGTGTAAATATGTTCTAG 933 0.4094 MDLAKSKGSGEVLDHVDERVGEDFNQLVEGNAIDAGGGHSLGERVSVSGKDGTPEETCNGLGLNGELKEGLQEVSDQNMGDPQEINDTLHGVDQGTSYSSRNLISGEVPETFVIIDPSAQIDCVSGENTKLEAKPNDSGLSKVSMKVIKGVSEIDKNSCVIDVNRGSCDGFSENLEGEMICRICHLASGQPLEAASIGTVSSATTNTDLIQLGCACKDELGIAHNHCAEAWFKIKGNRLCEICGETAKNVSDVADHGLMEEWNDTRFIGNDNTSSRRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03609 310 Pfam RING-variant domain 199 243 IPR011016 GO:0008270
Phac2g03609 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 255 IPR013083 -
Phac2g03609 310 ProSiteProfiles Zinc finger RING-CH-type profile. 173 250 IPR011016 GO:0008270
Phac2g03609 310 SMART ringv_2 180 244 IPR011016 GO:0008270
Phac2g03609 310 PANTHER ZINC FINGER, RING-CH-TYPE 83 310 - -
Phac2g03609 310 SUPERFAMILY RING/U-box 178 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03609 Phac-Chr2 37032518 37036409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03609 161 309 C3H Transcription Factor Family AT5G05830 38.462 2.87e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03609 - - gmx:100791129 560.451