Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03608 ATGGATCTGGCAAAAAGCAAAGGCAGTGGTGAAGTTTTGGATCATGTTGATGAAAGGGTGGGTGAGGATTTTAACCAATTGGTTGAAGGAAATGCAATTGATGCAGGAGGTGGACATAGCTTGGGTGAAAGAGTTAGTGTAAGTGGGAAAGATGGGACTCCTGAAGAAACGTGTAATGGTCTTGGTTTGAATGGGGAGCTAAAAGAGGGGCTACAAGAAGTTAGTGATCAGAACATGGGTGACCCTCAAGAAATTAATGATACATTACACGGGGTTGATCAAGGAACCAGTTATAGTTCAAGAAATTTGATTAGTGGGGAAGTGCCTGAGACTTTTGTTATAATAGATCCTTCCGCTCAGATTGATTGTGTCAGTGGAGAAAATACAAAATTGGAAGCTAAACCTAATGATTCAGGGTTGAGCAAGGTGTCCATGAAAGTAATAAAAGGGGTGTCTGAGATAGATAAAAATTCATGTGTGATTGATGTAAACCGTGGCAGCTGCGACGGTTTTAGTGAGAATTTGGAAGGTGAAATGATTTGTAGGATTTGCCATCTGGCCTCTGGGCAACCATTAGAAGCAGCATCTATCGGCACTGTAAGTAGTGCTACTACTAATACAGATTTGATTCAGCTTGGTTGTGCATGTAAAGATGAGTTAGGTATTGCTCACAATCATTGTGCTGAGGCATGGTTCAAGATTAAAGGAAACAGGTAA 717 0.41 MDLAKSKGSGEVLDHVDERVGEDFNQLVEGNAIDAGGGHSLGERVSVSGKDGTPEETCNGLGLNGELKEGLQEVSDQNMGDPQEINDTLHGVDQGTSYSSRNLISGEVPETFVIIDPSAQIDCVSGENTKLEAKPNDSGLSKVSMKVIKGVSEIDKNSCVIDVNRGSCDGFSENLEGEMICRICHLASGQPLEAASIGTVSSATTNTDLIQLGCACKDELGIAHNHCAEAWFKIKGNR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03608 238 PANTHER ZINC FINGER, RING-CH-TYPE 77 238 - -
Phac2g03608 238 ProSiteProfiles Zinc finger RING-CH-type profile. 173 238 IPR011016 GO:0008270
Phac2g03608 238 SMART ringv_2 180 238 IPR011016 GO:0008270
Phac2g03608 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 174 238 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03608 Phac-Chr2 37032518 37036409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03608 176 238 C3H Transcription Factor Family AT5G05830 46.032 7.75e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03608 - - gmx:100791129 416.001