Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03604 ATGAAGCCCTTTTGCAGATTCTTGATTCTCTTATCGCTGTTTTCTCTGGTGGAATCTTCATGCAACAGTGAAGAAGAGCACGTCTTGGTGTCGAAGGCTTTCAAATCAGTCTCTGGCTTCAACGCTAACTCCTGGTTCCAAACCAACTGTTCACAAACTCAAATCACCAGAATAGTACTTCCATCCCAAAACCTCACTGGCACAATCTCCTGGGGTTACCTGAGGAACATGTCCAACCTACAGGTTCTCGACCTCTCAGGAAATTCCTTACAAGGCCACGTGCCAAGCTGGTTTTGGTCAACTTCATCCTTATTGGAAATAAACCTCTCCAGAAACAGGTTCGGAGGGAGCATCATTGTCCACTCCTCCAAACCCACACCACAAAATACCTCGTTATCAATTTCATCCATTCAAACGCTCAATCTCTCCCACAACAGGTTCACCAATTCAATCCAACTTTCTGCCTTCCAGAACCTTAAAACCCTCGACCTTTCCAACAACAACCTGCGAACACTCCCCTCCGGACTCCAAAACCTCTCCAAGCTTGTACACCTCGATCTCTCAAACTGTAATCTCCAAACCAACGTAAAACCAGTTTCCTCTCTTCACTCACTTCGCTACTTGGACTTATCAAACAACACCTTGGCGGGAAATTTCCCTTTGGATTTCCCTCCACTCTCCACCCTCGAATTCCTGAACATCTCCTATAACAACTTCACCTCATCAACTAGCCTAACCAAGTTCAACAGTTTCGGTAAATCAGCTTTTGTCCACGCTGGCAACAATTTCACCTACGACAACACCGCGTCCAAAACGACCAACAGCAGTAAAAACTCAGCGCAAGCCACCCACAAGAAACTAGGGAAGAGAAAATCCAAAACGCTGATTGCTGCAGCCTCGTCAGCAGGATCAGCCCTTGTCCTAATTCTGTTGTCCATTTGGGTACTCCGCATTATTATTCGGAAGAGGAAGCAACGCGCCAAGAGGAGCAAGTGGGCGATTTCCATGCCGGTCCCACATGGAATGAACGTGGTGCCTAGCAGGGTGGAGAAATCAGGGCCGTTCGCGTTCGAGACTGAATCGGGGTCAACGTGGGTGGCTGACCTGAAGGAACCGTCTTCTGCGCCGGTGGTGATGTTCGAGAAGCCGTTGATGAACCTTAGCTTCAAGGACCTTATTGTTGCCACCTCACACTTCGGTAAAGACTCGCTGCTCGCGGAGGGAAGGTGTGGGCCCGTTTACAGAGCCGTGCTGCCGGGGGACCTCCACGTGGCAATCAAGGTCCTGGAACACGCTAGAGACGTTGATCCTGATGACTCAGTCGCCACGTTCGTTGACCTCTCAAGACTCAAGCACCCCAACTTGTTGCCCCTCTCCGGTTACTGCATTGCTGGTAAGGAGAAACTGGTACTGTACGAGTACATGGCGAACGGCGACCTAGGAAGGTGGCTACACGAGCTTCCAACTGGGGATACCAACGTGGAGGACTGGACAAGCGACACGTGGGAGATTCAAAACGGCGTCGTCGACGATGGATCCCCAGAAAAGATGGGGTGGCTGACACGACACCGGATCGCGGTTGGGATAGCGCGTGGTCTCGCTTACCTGCACCACGCGCGTTCGAAGCCCGTGGTGCACGGCCACTTCGTCACCTCCAACATTCTACTCGCCGACGATTTCGAGCCCCGGATCTCCGATTTCGGGTTGCGACCCGACCCGAACCCGAACGGCGGCATTGAGGCCGACGTGTACTGCTTCGGGGCGGCGCTGATGGAGCTCCTAACTGGGAAGGAAAGCACGGCGGAGACGGTGGCAGCGGCGAGGAAGGCGGTGAGGGAGGGGCGCGGCGTTAGGGTTCTGGACGAGAGGCTCCTAGTCGGTGGTGACTCGGTAGTGAGTGAGATGGTGGAGAGTCTCCGAGTGGCGTTTTTGTGTACGGCGGAAGACCCTTGGAAGAGGCCAACAATGCAGCAGGTTTTGGGTTTGCTGAAAGACATTCGTCCTCATGAACAGCAACTCGTGACGAGTTGA 2031 0.5268 MKPFCRFLILLSLFSLVESSCNSEEEHVLVSKAFKSVSGFNANSWFQTNCSQTQITRIVLPSQNLTGTISWGYLRNMSNLQVLDLSGNSLQGHVPSWFWSTSSLLEINLSRNRFGGSIIVHSSKPTPQNTSLSISSIQTLNLSHNRFTNSIQLSAFQNLKTLDLSNNNLRTLPSGLQNLSKLVHLDLSNCNLQTNVKPVSSLHSLRYLDLSNNTLAGNFPLDFPPLSTLEFLNISYNNFTSSTSLTKFNSFGKSAFVHAGNNFTYDNTASKTTNSSKNSAQATHKKLGKRKSKTLIAAASSAGSALVLILLSIWVLRIIIRKRKQRAKRSKWAISMPVPHGMNVVPSRVEKSGPFAFETESGSTWVADLKEPSSAPVVMFEKPLMNLSFKDLIVATSHFGKDSLLAEGRCGPVYRAVLPGDLHVAIKVLEHARDVDPDDSVATFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEYMANGDLGRWLHELPTGDTNVEDWTSDTWEIQNGVVDDGSPEKMGWLTRHRIAVGIARGLAYLHHARSKPVVHGHFVTSNILLADDFEPRISDFGLRPDPNPNGGIEADVYCFGAALMELLTGKESTAETVAAARKAVREGRGVRVLDERLLVGGDSVVSEMVESLRVAFLCTAEDPWKRPTMQQVLGLLKDIRPHEQQLVTS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03604 676 Gene3D Transferase(Phosphotransferase) domain 1 475 574 - -
Phac2g03604 676 Pfam Leucine rich repeat 136 192 IPR001611 GO:0005515
Phac2g03604 676 Pfam Leucine rich repeat 55 114 IPR001611 GO:0005515
Phac2g03604 676 Gene3D Ribonuclease Inhibitor 16 129 IPR032675 -
Phac2g03604 676 SUPERFAMILY L domain-like 42 242 - -
Phac2g03604 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 581 667 - -
Phac2g03604 676 FunFam Calmodulin-binding receptor kinase CaMRLK 135 245 - -
Phac2g03604 676 Gene3D Transferase(Phosphotransferase) domain 1 575 674 - -
Phac2g03604 676 PRINTS Leucine-rich repeat signature 159 172 - -
Phac2g03604 676 PRINTS Leucine-rich repeat signature 202 215 - -
Phac2g03604 676 ProSiteProfiles Protein kinase domain profile. 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac2g03604 676 SMART LRR_typ_2 179 203 IPR003591 -
Phac2g03604 676 SMART LRR_typ_2 156 178 IPR003591 -
Phac2g03604 676 SMART LRR_typ_2 77 100 IPR003591 -
Phac2g03604 676 SUPERFAMILY Protein kinase-like (PK-like) 376 667 IPR011009 -
Phac2g03604 676 FunFam Putative LRR receptor-like serine/threonine-protein kinase 360 474 - -
Phac2g03604 676 Gene3D Phosphorylase Kinase; domain 1 359 474 - -
Phac2g03604 676 Gene3D Ribonuclease Inhibitor 130 301 IPR032675 -
Phac2g03604 676 Pfam Protein tyrosine and serine/threonine kinase 403 571 IPR001245 GO:0004672|GO:0006468
Phac2g03604 676 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03604 Phac-Chr2 36972669 36976579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03604 55 666 Receptor kinase-like Gene Family AT5G07280 30.734 1.14e-72 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Phac2g03604 PK_Tyr_Ser-Thr 6.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03604 - - gmx:100788556 1056.97