Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03566 ATGTCTAACATGATTGCACTTGCATTAATGGTTATGGAAGATGAAAAGCAAAGGGCCAAGGATGAGAGATTGTGTGAGAGAGTGAAGATGAAGAAGAAGAGGAAGTTTGTTGGGGTGAGACAAAGGGCTTCAGGGAAATGGGCAGCAGAGATCAAAGACACGTCAAAGAAGATTAGGATGTGGCTTGGTACTTATCAAACTGCTGAGGAAGCTGCTCGAGCTTATGATGAAGCTGCTTGTCTCCTTAGAGGTTCAAACACTCGCACCAATTTCTCTACTCAACCCTCTGCTACCATTTCTACAAATTCTCCTATATCTCTAAAACTTACAAATCTCCTTCATCGTAAAGCCATGTCAAATCAAACTCAACTTCAAAACCATCCCTCTGCTATAACTCCAACTTTTCAAGGTGCAACTGCTCCCAATAACATCATGGTCATGGAACAAACCTCTGCTTCTAGTGGTCAAGCTCAGTCTTTGTTTGTGGTTCAGAACCAAGTCTCTAATAACTTGTATGGACTAGATATGAATATGATCGATTGTGCCATGGGTATCACACAAAATGCATCGCAGCTTCATTTCTCTTGGCCTTTAGCCCAACAAAGGATTAACGAATTACCATTACCAAAAGATGGTTTCACTTTAGAAAGGCAATTATCAGACTCGGTGTATGCCACCAATGAGTACCACCATTTGGAGGATACATATGAATATAAGTATGAGTATGATGTCAATTATCCTCTCTCTCACTTTTTCTGCTTCACCTGA 768 0.4076 MSNMIALALMVMEDEKQRAKDERLCERVKMKKKRKFVGVRQRASGKWAAEIKDTSKKIRMWLGTYQTAEEAARAYDEAACLLRGSNTRTNFSTQPSATISTNSPISLKLTNLLHRKAMSNQTQLQNHPSAITPTFQGATAPNNIMVMEQTSASSGQAQSLFVVQNQVSNNLYGLDMNMIDCAMGITQNASQLHFSWPLAQQRINELPLPKDGFTLERQLSDSVYATNEYHHLEDTYEYKYEYDVNYPLSHFFCFT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03566 255 FunFam ethylene-responsive transcription factor RAP2-11 34 93 - -
Phac2g03566 255 CDD AP2 35 91 IPR001471 GO:0003700|GO:0006355
Phac2g03566 255 Gene3D AP2/ERF domain 34 94 IPR036955 GO:0003700|GO:0006355
Phac2g03566 255 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Phac2g03566 255 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Phac2g03566 255 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Phac2g03566 255 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 23 155 - -
Phac2g03566 255 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Phac2g03566 255 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Phac2g03566 255 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03566 Phac-Chr2 36699695 36700818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03566 15 255 AP2-EREBP Transcription Factor Family AT5G19790 37.828 9.43e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac2g03566 AP2 3.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03566 K09286 - gmx:100809046 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g03566 2 36699695 36700818 Phac2g03566 2 36699695 36700818 ECH