Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03516 ATGGAGGAAGAGGGTTATTCGGAGGGAGACAATAATCGGAAAAGGGGTGGCACAGACGATGATAGCAATGAGAATAACAACAACAACATCACCAATCACGGAAGTAGTAGCAAGATTGTGAATTCTAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAAACCCCTTTTCAACTTGAAACCCTTGAGAAGGCTTATGCTGTGGATAATTACCCGTCGGAGACGATGAGGGGAGAACTTTCTGAGAAATTGGGTTTGTCGGATCGGCAGCTTCAGATGTGGTTCTGCCACAGGAGGTTGAAGGACAAGAAGGACTTGACGTCCAAGAAACTGCCACGAAAGGTGGTGGTAGAGCCTTTGCCGGGATCACCTACAGATGACCCCATGTTGGGCCCTCCAGAGCTTGGTAATGAGTATGGATCCGGGTCCGGTTCAGGGTCCAGCCCTTATGCCCGAGTGGAGCCCCTGAACATTGTTCCCCGGGGTGTGCCTGGTTATTACGAGTCCCCACGGGCTATGATGGAGAACAGAGCAATTTCTTGTATTGAGGCGCAGTTAGGGGAGCCGTTGAGGGAAGATGGACCAATTCTAGGAGTAGAGTTTGATCCATTGCCACCAGATGCCTTTGGGGCACCTATAGTTACAGAACAGCAGAAGCTACCTACTTTTGCCTATGAAAGTAAAATATATGAAAGACATGATGTTAGAGCTAATAAGGCTATGACAAGGACATTCCGTGACTATCGATCTCTACCAAGCCAGTCTGGCACTAGGTCTGATACTTCTGGACCGTTCAGCAAATCTCATTTACATGATCCAATAGAAGGTCCTGCCAGAAATCCTCATTTGGCCCTTGGAAATGAAACTCTACCTAGAATTCGTGCTGGTCAAGGTCAATTCCGTGGTCGTCTTTTGTCTCAACAAGATAAGCAATTGATTCCCAATCAATCTCCTACGAGGGATGATAATGCTGCCCCAATTAGGGAAGTGGACCCAACCATACTTAATGTTGGAACAAGCTCTCACTTTGCTGATCACCAAATTGTTGTGCCAGAAAATCTCCATTCTCAACCTAGTGGTCAAGTTTTGCATAACAACAATGCAACACGCATTGAGAAAAAACGAAAGAGTGATGATGTCCGTGATGTAGAAGCACATGAGATGAAAATCCGGAAAGAGATTGAGAAGCAAGATAATCTTAGACGAAAGAATGAAGAGAGGATGAGAAAAGAAATAGAGAAACAAGACCGTGAAAGAAAGAAGGAAGAAGAGAGGTTAATGCGTGAGAGACAACGAGAAGAAGAAAGAGCAAGACGTGAGCAAAAACGTGAACTTGAGCGAAGGGAAAAGTTTTTGCTGAAAGAAAATTTAAGAGTAGAAAAAATGAAGATAAGAGAAGAGCTTCGCAGAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCCCGTAGAATAGCTAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTGGCTGCCTCAAGCAAGGGGTTTTCCTCTATTATCCATCTTGATTTTGATACTTTGCAACATGTTGAGTCATTTAGGGATTCATTGTGCGTTTTCCCACCAAAGAGTGTAAAGCTAAAAAAACCATTTGCAATCAAACCCTGGATGAACTCAGAGAAGAATGTTGGCAATCTTCTCATGGTTTGGAGATTTTTGATTACTTTTGCTGATGTTCTAGAGTTATGGTCTTTCACTCTAGATGAGTTTGTTCAAGCATTTCATGACTATGATTCAAGATTATTGGGTGAGATACATGTTGCTCTTCTTAAGGTGGTAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAATGAATCAAAATGGTGCTGCTAACTCTGGAGGTGGTCATCCAGAGATTGTGGAAGGGGCATATGCGTGGGGCTTTGACATACGCAATTGGCATAAGCACTTGAATCTATTGACGTGGCCAGAAATTTTCCGACAGCTAGCTTTATCTGCAGGATATGGACCACAGTTGAAGAAAAGAAGTACTACCTGCTCATATGCAAATAATAAAGATGAGGGAAGAAGTTGTGAAGATATCATTTCTAAACTTCGTAATGGTTCAGCGGCTGAAAATGCAGTTACTAAAATGCATGAGAGAGGTCTGTTAGCCCCTCGAAGATCTAGACATCGATTAACTCCTGGTACAGTTAAATTTGCAGCATTTCATGTTCTATCACTTGAGGGTGACAAGGGATTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGAGACCTGACGACCAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTAACAAGAGATACCAAGCTTTTTGAAAGAATAGCACCGTCAACATATTGTGTACGTCAGGCATTTAGAAAGAACCCTGCTGATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGAGGAGGATACTGATGACGTTGAAAGAGAAGAGTCAGAGAGTGACGAAATTGACGAGGACCCTGAAGTTGATGATTTGGTAAATTCGTCAAGTGCTAACAAAACATCTGGACCGTGTGATGATTTCTCATCCAATGGAAAAGAAAATTTAGGCCATAATGTTGGACATCAGGGTGAGTTTGATAAGGATCTGCCTCGTTTTCCTGAGAGTGGTTCCAAGAAGATTGATACTCCAATTGCTGTAACCGGGAAACCTGGTGCTTGTGAAGATTTAAATGTTGGAAATCTCGGTGAAGATAATATGGAAATTGATGAAAGCAAGCCTGGAGAGTCATGGGTTCAAGGGCTTGCAGAAGGAGAATTTTCTGACCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGTGTTGGTTGGTGTGGCAAATGAAGGAAACTCAATCCGTGTCATTCTAGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGAAGCACAACTAGATAAATTTCGATTAAAAGATGATATTTTCAGTAAATCTGATTTTCCATCTATCAATGGGAATAAAGTTGAAATACAACATTCTTGTTCTGCCATGGAGGGAAACCAAAGCCCATCATTGCTTGGCAACAATTGTAATAATGTGCCCTCTCCCGGCACTGCAGAAAATCAAAAAGCAGCTCCAGGTGTACAGAGCCTGTCTATTGAAAAACACTCTTCAGTTCAAGATCTCTGCACTGGCCCAGATAACCCTCAGATTCAGACATTTGCACAGTATTCAAAAAGGTCACGGTCTCAACTGAAATCTTATATTTTCCACATAGCAGAGGAGATGTGTGCCTACAGATCCTTACCCCTTGGGCAAGATCGAAGACGTAACCGTTATTGGCAATTTGTTGCATCTGCTTCTTCCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAGTTCCTCGATGGCAATTGGAGGCTTATTGATACTGAAGAGGCCTTTGATGCACTTCTGAATTCGCTTGATTCACGTGGGGTCAGGGAATCTCATTTGCGACTAATGTTGCAAAAGGTTGAGAGTTCCTTCAAGGAAAATGTTCGTAAGAATACACAATGTTCCAAAGTTGGAAGCAGAGGCGAAACATGTGTTAAAAATGAAGCTGACGAAACAGATTCCAGTCCTGATCGCCACACTGGATCTGACAGTCCCAGCAGTACCCTTTGTGGCTTGAACTCTGACAGTTTGGAAACTTCCTCATCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGCGACAAGAAATCTGCCTTGAGAAGGTATCAAGATTTTCAAAAGTGGACATGGAAAGAATGCTATAACTCATCAATATTATGCGCCATGAAATACGGGAAGAAAAGAGGCAAATCTCAGGTTGTTGTCTGTGATATCTGCCTCAATCCTTATTTCTTTGAAGACTCCCATTGCAATTGTTGCCACCGGACTTTTCCTTCAAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGAAAAGTTATCGAAAGATATTTGTATTTTGGATTCAAATCTTCCCTTACGGACAAGATTGCTTAAGGCCCTGCTAGCTCATATTGAGGTTTCTATTCCACCTGAAGCGTTTCAATCAAATTGGATCGAAGATATTAGGAGGCATTGGAGTGTGAAGTTGAGCAAATCATCTTCTGTAGAGGAACTGCTGCAGATATTGGCCCTACTTGAGAGAGCATTGAAGCGGGACTTTCTATCATCAACCTTTTCTACAACAGGGGAACAATTGGGGTTGAACACTATGTTAGAGAATGTTGCACAAACCTCCGCAGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACTGACAACTTCAGCCGTGTCTCTCAGACTTTTTGAGTTTGATGAATCAATTGTCTACGTACTACATGAGAAACCTGAACCTTCTGAGGAGAAAGAAGATAGGCAATACATAAAGCTTCCTTCAAGATACAATGCTTCCAAATCTATTAAAGTGGTTGAAACAGCAGACTTGGACTGTGATGAATTCATGAAAGTTAAATCTAATCCTGCGAAAATTGTGCAAAACAACAATAAACGAGGACGAGGTAGTTCTGTCAAAGGACGGGTTAAAAATATATCTAAAACCAAACGAAATAATGGTCGTCGGTGCAGTGCTAAGGTTGCTGGGAATCTAAATCAAAGGGTAAAACAACAGGGAGGGGGATCACAAGGACAAGCTGGTGGACGTGGTCGTCGAACTGTTCGGAAAAGAAGAGTGGGGAAAAAGGCTGTTGAAGATCTGTTGCTTGGCCATAGGGGTGCCTCTCATAGCTCCAACATTGCTAGAGAACCATTAAGAAGCTTGGATGAGGAGTGGGATGATGAAAAGGGAAGTCCCATGACTCCAATCCACATGGGGACTGCTAACATTAGTAACAGCACTGAAGAGGCTGAATCTGATGACAATGTCCAAGCAATGGAGTCTGATGACAATGTCCAAGCAGTGGATTCTGATGACAATGGCCAGGCTGTGGAATCTGATGACAATGGCCAAGCTGTCGAATCTGATGACAATGGCCAAGCTGTGGAATATGATAAAGGAAACTGGGAAATAGGTTTTAATGGTAATCCCAGCCGATGGCGGGAGGATATGGTTGGAATGAGTGATGAAGATGTGGAAGCTTCTGAAGATGAGAATCAGAACGAGAATGGCATTGAAGAGAATGAAGAGGAGGATTCAGATGCAGATGCAGATGTTATGAGCGAGGAGGGTTCAGATGGTACTGCAAACAGAATTGTAAATGAAGAAAGCTCAGACTCAGATGTCTCTGAAGATTCTTCTGATTAG 5370 0.4261 MEEEGYSEGDNNRKRGGTDDDSNENNNNNITNHGSSSKIVNSNEGQSKPKRQMKTPFQLETLEKAYAVDNYPSETMRGELSEKLGLSDRQLQMWFCHRRLKDKKDLTSKKLPRKVVVEPLPGSPTDDPMLGPPELGNEYGSGSGSGSSPYARVEPLNIVPRGVPGYYESPRAMMENRAISCIEAQLGEPLREDGPILGVEFDPLPPDAFGAPIVTEQQKLPTFAYESKIYERHDVRANKAMTRTFRDYRSLPSQSGTRSDTSGPFSKSHLHDPIEGPARNPHLALGNETLPRIRAGQGQFRGRLLSQQDKQLIPNQSPTRDDNAAPIREVDPTILNVGTSSHFADHQIVVPENLHSQPSGQVLHNNNATRIEKKRKSDDVRDVEAHEMKIRKEIEKQDNLRRKNEERMRKEIEKQDRERKKEEERLMRERQREEERARREQKRELERREKFLLKENLRVEKMKIREELRREKEAERRKAALEKATARRIAKESMELIEDEQLEMMELAASSKGFSSIIHLDFDTLQHVESFRDSLCVFPPKSVKLKKPFAIKPWMNSEKNVGNLLMVWRFLITFADVLELWSFTLDEFVQAFHDYDSRLLGEIHVALLKVVIKDIEDVARTPSTGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNLLTWPEIFRQLALSAGYGPQLKKRSTTCSYANNKDEGRSCEDIISKLRNGSAAENAVTKMHERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGDKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRQAFRKNPADAESILSEARKKIQIFENGFLAEEDTDDVEREESESDEIDEDPEVDDLVNSSSANKTSGPCDDFSSNGKENLGHNVGHQGEFDKDLPRFPESGSKKIDTPIAVTGKPGACEDLNVGNLGEDNMEIDESKPGESWVQGLAEGEFSDLSVEERLNALVVLVGVANEGNSIRVILEDRLEAANALKKQMWAEAQLDKFRLKDDIFSKSDFPSINGNKVEIQHSCSAMEGNQSPSLLGNNCNNVPSPGTAENQKAAPGVQSLSIEKHSSVQDLCTGPDNPQIQTFAQYSKRSRSQLKSYIFHIAEEMCAYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEFLDGNWRLIDTEEAFDALLNSLDSRGVRESHLRLMLQKVESSFKENVRKNTQCSKVGSRGETCVKNEADETDSSPDRHTGSDSPSSTLCGLNSDSLETSSSFKIELGKSESDKKSALRRYQDFQKWTWKECYNSSILCAMKYGKKRGKSQVVVCDICLNPYFFEDSHCNCCHRTFPSNNGFNFSKHAFQCGEKLSKDICILDSNLPLRTRLLKALLAHIEVSIPPEAFQSNWIEDIRRHWSVKLSKSSSVEELLQILALLERALKRDFLSSTFSTTGEQLGLNTMLENVAQTSADPESVAVLPWVPLTTSAVSLRLFEFDESIVYVLHEKPEPSEEKEDRQYIKLPSRYNASKSIKVVETADLDCDEFMKVKSNPAKIVQNNNKRGRGSSVKGRVKNISKTKRNNGRRCSAKVAGNLNQRVKQQGGGSQGQAGGRGRRTVRKRRVGKKAVEDLLLGHRGASHSSNIAREPLRSLDEEWDDEKGSPMTPIHMGTANISNSTEEAESDDNVQAMESDDNVQAVDSDDNGQAVESDDNGQAVESDDNGQAVEYDKGNWEIGFNGNPSRWREDMVGMSDEDVEASEDENQNENGIEENEEEDSDADADVMSEEGSDGTANRIVNEESSDSDVSEDSSD* 1790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1624 1639 - -
Phac2g03516 1789 Pfam HB1, ASXL, restriction endonuclease HTH domain 740 808 IPR007759 GO:0006355
Phac2g03516 1789 Gene3D - 32 107 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 863 888 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1667 1697 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1233 1248 - -
Phac2g03516 1789 ProSiteProfiles DDT domain profile. 558 617 IPR018501 -
Phac2g03516 1789 Pfam Homeodomain 48 104 IPR001356 GO:0003677
Phac2g03516 1789 MobiDBLite consensus disorder prediction 837 889 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 249 266 - -
Phac2g03516 1789 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1122 1194 IPR028941 -
Phac2g03516 1789 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 34 1789 IPR044977 GO:0006357
Phac2g03516 1789 SMART testlast3 558 617 IPR018501 -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 117 152 - -
Phac2g03516 1789 Pfam DDT domain 560 614 IPR018501 -
Phac2g03516 1789 SUPERFAMILY Homeodomain-like 33 104 IPR009057 -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 22 54 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1 57 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1645 1660 - -
Phac2g03516 1789 SMART HOX_1 47 109 IPR001356 GO:0003677
Phac2g03516 1789 Coils Coil 383 485 - -
Phac2g03516 1789 ProSiteProfiles HARE-type HTH domain profile. 740 809 IPR007759 GO:0006355
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1572 1789 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 400 441 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1730 1762 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 7 21 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 837 862 - -
Phac2g03516 1789 MobiDBLite consensus disorder prediction 1219 1248 - -
Phac2g03516 1789 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 946 988 IPR028942 -
Phac2g03516 1789 ProSiteProfiles 'Homeobox' domain profile. 45 105 IPR001356 GO:0003677
Phac2g03516 1789 CDD homeodomain 50 104 IPR001356 GO:0003677
Phac2g03516 1789 MobiDBLite consensus disorder prediction 249 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03516 Phac-Chr2 36251175 36262418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03516 41 1717 Homeobox Transcription Factor Family AT1G28420 47.796 0.0 1291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac2g03516 WSD 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03516 - - gmx:100818817 2683.29