Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03488 ATGTCAGCACAGAACCCCCCACATGACCAACCCCAAGAAGATGAAGTTGAAGATCAAAACCATTCGTTGAGCAACCAGGACAAAGACGAGGAGCATGTGGTTATAGGTTTGTCAGGATTGCAGTGTGCTGTCTGCCGAGGAATCATTCAAAATACAACAACGCTGATGGAATGCCTTCATAAGTTTTGCAAAGAATGCATTGAGAAATCCATACGCCTTGGTGTCAATGAATGTCCTGTTTGTCATGTTCATGTTAGTCAATTGTCACTGAAAGAAGATCCACAATACGATGCTATAGTTTCTGCTATAGTGCCACAGATTGTCAAGTACAAAAAACAGGGGGAAGTGGCTCTGCTTTTGCCTGGGAGGACTAATGATAAAGAGACTATGACCAATGTTAGTGACAAGAGGGCTAGGAATAGTCGCCTCACCAAATATGTTGATCTTCTACGTAACTCTGATGTGAAGATTGATCAGCTGGAGATTCACCTTGAGCTTGTCTCTTTGGACGAGCAAAGGGTACCAAGTTTGCAGGAATCATATTTTCTGTGCAGGCCTAGCTGTACGGTGAAGACACTATGCAAGTATATTGAACGCAATGCAAAGATGCTGGCGAATCAAGTTGAATTATTCTTGATAGAAGAATCAGAAGCCAATGCTGAGAGTGGGAAGATAACAGTTGATGCAGACAAGGACAAATTGCGTGTTCTACGAGATGAAGAAACTTTGGCTGAACTATACACTCCAAATGTCACTCACTCTGCTCATCTGGTAAATTCTAACAGCCTAACCTAG 795 0.4252 MSAQNPPHDQPQEDEVEDQNHSLSNQDKDEEHVVIGLSGLQCAVCRGIIQNTTTLMECLHKFCKECIEKSIRLGVNECPVCHVHVSQLSLKEDPQYDAIVSAIVPQIVKYKKQGEVALLLPGRTNDKETMTNVSDKRARNSRLTKYVDLLRNSDVKIDQLEIHLELVSLDEQRVPSLQESYFLCRPSCTVKTLCKYIERNAKMLANQVELFLIEESEANAESGKITVDADKDKLRVLRDEETLAELYTPNVTHSAHLVNSNSLT* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03488 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 146 IPR013083 -
Phac2g03488 264 PANTHER OS11G0578200 PROTEIN 130 257 IPR044592 -
Phac2g03488 264 ProSiteProfiles Zinc finger RING-type profile. 42 82 IPR001841 -
Phac2g03488 264 SUPERFAMILY RING/U-box 38 113 - -
Phac2g03488 264 CDD RING-HC_RING1-like 40 103 - -
Phac2g03488 264 SMART ring_2 42 81 IPR001841 -
Phac2g03488 264 MobiDBLite consensus disorder prediction 10 28 - -
Phac2g03488 264 ProSitePatterns Zinc finger RING-type signature. 58 67 IPR017907 -
Phac2g03488 264 Pfam Zinc finger, C3HC4 type (RING finger) 41 81 - -
Phac2g03488 264 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03488 Phac-Chr2 36067952 36074128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03488 40 92 C3H Transcription Factor Family AT3G23060 42.593 1.41e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03488 K10695 - qsu:112040979 127.102