Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03480 ATGGACGCAAGCAGGTCTGAGGGAAAGAGGGTCTTGAGGTACAACGAGGAGGAGGAGGAGGATGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGTTGAGACGGGTTTTGAAGAAGAAGGAAGGAGGAATAAGAGAGTAATGACAGATCTCTATGGAAAGAAAGGGTCCAAAGCTGGAGGCTCAATGCCACCTTCTTGTCAGGTAGATAATTGTGATGCTGATCTAAGTGAAGCTAAGCAGTATCACAGAAGGCACAAGGTTTGCGAGTACCATGCCAAGGTTCATTCCGTACTCATGGCAGGGCTGCAACAAAGGTTTTGCCAACAATGTAGCAGATTCCATGAGCTGTCTGAATTTGATGAATCAAAAAGGAGTTGTAGAACACGATTGGTTGGCCATAATGAGAGGCGTCGCAAAAATGCAGTTGACTGTCGTGGAGAATAA 444 0.455 MDASRSEGKRVLRYNEEEEEDEEEEEEEEEEVETGFEEEGRRNKRVMTDLYGKKGSKAGGSMPPSCQVDNCDADLSEAKQYHRRHKVCEYHAKVHSVLMAGLQQRFCQQCSRFHELSEFDESKRSCRTRLVGHNERRRKNAVDCRGE* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03480 147 Gene3D - 56 127 IPR036893 GO:0003677|GO:0005634
Phac2g03480 147 Pfam SBP domain 66 139 IPR004333 GO:0003677
Phac2g03480 147 MobiDBLite consensus disorder prediction 1 43 - -
Phac2g03480 147 Coils Coil 9 35 - -
Phac2g03480 147 MobiDBLite consensus disorder prediction 1 16 - -
Phac2g03480 147 ProSiteProfiles Zinc finger SBP-type profile. 63 140 IPR004333 GO:0003677
Phac2g03480 147 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 41 141 IPR044817 GO:0003677
Phac2g03480 147 PIRSF SBP 2 147 IPR017238 GO:0003677|GO:0003700|GO:0009908
Phac2g03480 147 FunFam Squamosa promoter-binding-like protein 14 57 127 - -
Phac2g03480 147 MobiDBLite consensus disorder prediction 17 35 - -
Phac2g03480 147 SUPERFAMILY SBT domain 64 143 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03480 Phac-Chr2 36025715 36027747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03480 52 141 SBP-box Gene Family AT1G53160 67.778 1.45e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac2g03480 SBP 4.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03480 - - gmx:100527199 219.164