Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03474 ATGGACAACTTTCCTGACCCATTTTCAGCAACCACCACCAACCCATTAATCCTTGAACAACAAAGCATGGGAGAACTAAAAAATGTTAACTTCCCTGTTGACAGCAGTGGACATGTTGGCTTTCCTGACCCTTATTACTCTCCATTTGACCAGAACATGCAGTTCCAACAAGTGAACCAATATCCTTTGCATACCCTTCAAACAGGACAACCTAATGCAATTTATGGGGCACCAAATTCTGATGTTCAAGGATGGTCACAACAACTAGAGGAAAAAGAACATAGGAAGAGTGTGGGAACATTGACTAGCAAAGTTGCTAGGGACAAAAGGAAACAAGTAAGACAGAAGAGTAAGAGTGTTCCTGTGGCTCCTTTGGTACCAACAAAAGGGATAATAAAGGAACAACCTGTTCCTGGAGGAGGATCAGATTATGGAAAGCTCACTATCAACCAAGATAGAACTTTCACTGTTTTTGGCAACCCAGATGGGAAGTTAGAGGAAGTTTTCACAAAGCAGTTGAAGAATAGTGACGTTAGTGTCCTAGGTCGCATTGTGCTCCCAAAGAGGGAGGTTGAGGCGAAGCTTCCACCATTGACTGACAAGGAAGGAAAGGATATTATGGTCAAGGATGTTTATTCTGGGGTGATATGGACCTTGAAATACAAGTATTGGTCTAATAACAGAAGTAGAATGTATGTTCTCGAAAATGCAGGGGATTTAGTGAACCATTATGAACTACAAATGGGAGATTTGATAACCATTTACGAGGACGAAAGGAAAAATCTGTATGTGTGGGCTAGAAAAAAGAGAAATCCAGAAGGCGCGGTGTCTTTGTCAAAGAAAGAAGTTGAAGATGCTAACAACCTTTTGACTTCGATCAATGGTGGTGGAAGTTCTTCAAGTGAAGCAAAATTAGATATGAATATAGCAGAACATGATCAATTGTCGAACATTGCTGGGAACGGGGCACCAAGCCAAACAACCATCGAAGCCACACCACCAGCACCACCACCACAAGCACCACCAGCACCACCAGCACCTCTTGGTGGCAATAACCAGTGGATAAGCGATGAAGATGTCTACGGGGGCCTTGACAATATCTTCGAAATTGAGAACAGTTTTCATAGTTTTGATCACTTGAAAGATTACAAGACGTGGCCCTATTGA 1167 0.4233 MDNFPDPFSATTTNPLILEQQSMGELKNVNFPVDSSGHVGFPDPYYSPFDQNMQFQQVNQYPLHTLQTGQPNAIYGAPNSDVQGWSQQLEEKEHRKSVGTLTSKVARDKRKQVRQKSKSVPVAPLVPTKGIIKEQPVPGGGSDYGKLTINQDRTFTVFGNPDGKLEEVFTKQLKNSDVSVLGRIVLPKREVEAKLPPLTDKEGKDIMVKDVYSGVIWTLKYKYWSNNRSRMYVLENAGDLVNHYELQMGDLITIYEDERKNLYVWARKKRNPEGAVSLSKKEVEDANNLLTSINGGGSSSSEAKLDMNIAEHDQLSNIAGNGAPSQTTIEATPPAPPPQAPPAPPAPLGGNNQWISDEDVYGGLDNIFEIENSFHSFDHLKDYKTWPY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03474 388 MobiDBLite consensus disorder prediction 87 108 - -
Phac2g03474 388 SMART B3_2 169 270 IPR003340 GO:0003677
Phac2g03474 388 Pfam B3 DNA binding domain 169 269 IPR003340 GO:0003677
Phac2g03474 388 SUPERFAMILY DNA-binding pseudobarrel domain 168 273 IPR015300 -
Phac2g03474 388 MobiDBLite consensus disorder prediction 330 348 - -
Phac2g03474 388 MobiDBLite consensus disorder prediction 69 120 - -
Phac2g03474 388 CDD B3_DNA 169 264 IPR003340 GO:0003677
Phac2g03474 388 MobiDBLite consensus disorder prediction 317 355 - -
Phac2g03474 388 ProSiteProfiles B3 DNA-binding domain profile. 169 270 IPR003340 GO:0003677
Phac2g03474 388 MobiDBLite consensus disorder prediction 69 86 - -
Phac2g03474 388 Gene3D - 161 276 IPR015300 -
Phac2g03474 388 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 96 281 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03474 Phac-Chr2 35977525 35982099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03474 164 334 B3 DNA Binding Superfamily AT1G28300 42.373 2.37e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac2g03474 B3 4.4e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03474 K09287 - gmx:106797573 245.743