Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03473 ATGGACAACTTTCCTGACCCATTTTCAGCAACCACCACCAACCCATTAATCCTTGAACAACAAAGCATGGGAGAACTAAAAAATGTTAACTTCCCTGTTGACAGCAGTGGACATGTTGGCTTTCCTGACCCTTATTACTCTCCATTTGACCAGAACATGCAGTTCCAACAAGTGAACCAATATCCTTTGCATACCCTTCAAACAGGACAACCTAATGCAATTTATGGGGCACCAAATTCTGATGTTCAAGGATGGTCACAACAACTAGAGGAAAAAGAACATAGGAAGAGTGTGGGAACATTGACTAGCAAAGTTGCTAGGGACAAAAGGAAACAAGTAAGACAGAAGAGTAAGAGTGTTCCTGTGGCTCCTTTGGTACCAACAAAAGGGATAATAAAGGAACAACCTGTTCCTGGAGGAGGATCAGATTATGGAAAGCTCACTATCAACCAAGATAGAACTTTCACTGTTTTTGGCAACCCAGATGGGAAGAAGTTAGAGGAAGTTTTCACAAAGCAGTTGAAGAATAGTGACGTTAGTGTCCTAGGTCGCATTGTGCTCCCAAAGAGGGAGGTTGAGGCGAAGCTTCCACCATTGACTGACAAGGAAGGAAAGGATATTATGGTCAAGGATGTTTATTCTGGGGTGATATGGACCTTGAAATACAAGTATTGGTCTAATAACAGAAGTAGAATGTATGTTCTCGAAAATGCAGGGGATTTAGTGAACCATTATGAACTACAAATGGGAGATTTGATAACCATTTACGAGGACGAAAGGAAAAATCTGTATGTGTGGGCTAGAAAAAAGAGAAATCCAGAAGGCGCGGTGTCTTTGTCAAAGAAAGAAGTTGAAGATGCTAACAACCTTTTGACTTCGATCAATGGTGGTGGAAGTTCTTCAAGTGAAGCAAAATTAGATATGAATATAGCAGAACATGATCAATTGTCGAACATTGCTGGGAACGGGGCACCAAGCCAAACAACCATCGAAGCCACACCACCAGCACCACCACCACAAGCACCACCAGCACCACCAGCACCTCTTGGTGGCAATAACCAGTGGATAAGCGATGAAGATGTCTACGGGGGCCTTGACAATATCTTCGAAATTGAGAACAGTTTTCATAGTTTTGATCACTTGAAAGATTACAAGACGTGGCCCTATTGA 1170 0.4231 MDNFPDPFSATTTNPLILEQQSMGELKNVNFPVDSSGHVGFPDPYYSPFDQNMQFQQVNQYPLHTLQTGQPNAIYGAPNSDVQGWSQQLEEKEHRKSVGTLTSKVARDKRKQVRQKSKSVPVAPLVPTKGIIKEQPVPGGGSDYGKLTINQDRTFTVFGNPDGKKLEEVFTKQLKNSDVSVLGRIVLPKREVEAKLPPLTDKEGKDIMVKDVYSGVIWTLKYKYWSNNRSRMYVLENAGDLVNHYELQMGDLITIYEDERKNLYVWARKKRNPEGAVSLSKKEVEDANNLLTSINGGGSSSSEAKLDMNIAEHDQLSNIAGNGAPSQTTIEATPPAPPPQAPPAPPAPLGGNNQWISDEDVYGGLDNIFEIENSFHSFDHLKDYKTWPY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03473 389 SMART B3_2 170 271 IPR003340 GO:0003677
Phac2g03473 389 SUPERFAMILY DNA-binding pseudobarrel domain 169 274 IPR015300 -
Phac2g03473 389 CDD B3_DNA 170 265 IPR003340 GO:0003677
Phac2g03473 389 ProSiteProfiles B3 DNA-binding domain profile. 170 271 IPR003340 GO:0003677
Phac2g03473 389 MobiDBLite consensus disorder prediction 318 356 - -
Phac2g03473 389 MobiDBLite consensus disorder prediction 90 108 - -
Phac2g03473 389 Pfam B3 DNA binding domain 170 270 IPR003340 GO:0003677
Phac2g03473 389 MobiDBLite consensus disorder prediction 331 349 - -
Phac2g03473 389 MobiDBLite consensus disorder prediction 90 120 - -
Phac2g03473 389 Gene3D - 159 277 IPR015300 -
Phac2g03473 389 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 94 300 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03473 Phac-Chr2 35977276 35982099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03473 162 335 B3 DNA Binding Superfamily AT1G28300 42.778 8.91e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac2g03473 B3 4.4e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03473 K09287 - gmx:106797573 252.292