Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03460 ATGGAGAACAACCCTAGTTCATCAAAAAGTGATAGAAAATTCGTTGAGAGGGATAGAAGAAGTCAAATGAAGGATCTTTTCTCCAAGCTCAACTCAGTACTGCCTCATCAAAGCTCAAGGGAGAGAATTTCACGGCCAGATCAGATAGGTGAAGCCACAGACTACATAAAGAGTTTACAGATTAAGTTGGAGAAAATGAAGGAGAAAAAAAGCAACCTAACAGACATTGAAAGGTCAAGAAATGATAGCATGAATATGGGGTTGAAATCTTCACAATTTAAGATCCAACAAATGGGTTCAACCTTGGAGGTTGTTCTAGTAACTGGGTTGGATTGTCAATTCATTTTCAACGAGACCATTCGTATTCTTCAAGAAGAAGGATCAGACATAGTTAATGCCAGTTATACAGTTGTTGAAAATGCAGTTTTCCATACAATACACTGTCAGGTAGATGAATCTGCCAATGGAGCTTTGAGGATATCGGAGAAACTGAAGAATTATGCCAATGGACGGTAG 516 0.3857 MENNPSSSKSDRKFVERDRRSQMKDLFSKLNSVLPHQSSRERISRPDQIGEATDYIKSLQIKLEKMKEKKSNLTDIERSRNDSMNMGLKSSQFKIQQMGSTLEVVLVTGLDCQFIFNETIRILQEEGSDIVNASYTVVENAVFHTIHCQVDESANGALRISEKLKNYANGR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03460 171 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 6 166 - -
Phac2g03460 171 Pfam Helix-loop-helix DNA-binding domain 13 60 IPR011598 GO:0046983
Phac2g03460 171 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 72 IPR036638 GO:0046983
Phac2g03460 171 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Phac2g03460 171 Coils Coil 49 76 - -
Phac2g03460 171 SMART finulus 13 65 IPR011598 GO:0046983
Phac2g03460 171 Gene3D - 2 75 IPR036638 GO:0046983
Phac2g03460 171 FunFam Transcription factor bHLH162 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03460 Phac-Chr2 35874583 35875993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03460 3 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.857 1.37e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac2g03460 HLH 5.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03460 - - gmx:100810793 283.108